Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIPA1Q96FS4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 ESRRAP1-201ENST00000400596 1257 ntBASIC20.96■□□□□ 0.95
SIPA1Q96FS4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIPA1Q96FS4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 AL355472.2-201ENST00000422958 438 ntBASIC20.95■□□□□ 0.94
SIPA1Q96FS4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 AC100791.3-201ENST00000617619 330 ntBASIC20.95■□□□□ 0.94
SIPA1Q96FS4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SIPA1Q96FS4 AC068473.5-201ENST00000616428 2072 ntBASIC20.95■□□□□ 0.94
SIPA1Q96FS4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 PRORSD1P-201ENST00000295112 541 ntBASIC20.94■□□□□ 0.94
SIPA1Q96FS4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIPA1Q96FS4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms