Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 SMUG1P1-201ENST00000590640 811 ntBASIC20.03■□□□□ 0.8
VPS33AQ96AX1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 AL391422.3-201ENST00000603791 2761 ntBASIC20.02■□□□□ 0.8
VPS33AQ96AX1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS33AQ96AX1 AP005212.1-201ENST00000581547 1997 ntBASIC20.02■□□□□ 0.8
VPS33AQ96AX1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
VPS33AQ96AX1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS33AQ96AX1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS33AQ96AX1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS33AQ96AX1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20■□□□□ 0.79
VPS33AQ96AX1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20■□□□□ 0.79
VPS33AQ96AX1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS33AQ96AX1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20■□□□□ 0.79
VPS33AQ96AX1 PCDHAC2-203ENST00000615316 3011 ntBASIC20■□□□□ 0.79
VPS33AQ96AX1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS33AQ96AX1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20■□□□□ 0.79
VPS33AQ96AX1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20■□□□□ 0.79
VPS33AQ96AX1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS33AQ96AX1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS33AQ96AX1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
VPS33AQ96AX1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS33AQ96AX1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VPS33AQ96AX1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20■□□□□ 0.79
VPS33AQ96AX1 AC131281.2-201ENST00000520478 145 ntBASIC20■□□□□ 0.79
VPS33AQ96AX1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20■□□□□ 0.79
VPS33AQ96AX1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20■□□□□ 0.79
VPS33AQ96AX1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS33AQ96AX1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
VPS33AQ96AX1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS33AQ96AX1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20■□□□□ 0.79
VPS33AQ96AX1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20■□□□□ 0.79
VPS33AQ96AX1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20■□□□□ 0.79
VPS33AQ96AX1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
VPS33AQ96AX1 GABARAPL3-202ENST00000624044 1851 ntBASIC19.99■□□□□ 0.79
VPS33AQ96AX1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS33AQ96AX1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS33AQ96AX1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms