Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LSM10Q969L4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
LSM10Q969L4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LSM10Q969L4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LSM10Q969L4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.02■□□□□ 0.31
LSM10Q969L4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.02■□□□□ 0.31
LSM10Q969L4 AC121338.2-201ENST00000622535 1744 ntBASIC17.01■□□□□ 0.31
LSM10Q969L4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LSM10Q969L4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LSM10Q969L4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.01■□□□□ 0.31
LSM10Q969L4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LSM10Q969L4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LSM10Q969L4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LSM10Q969L4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LSM10Q969L4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17■□□□□ 0.31
LSM10Q969L4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17■□□□□ 0.31
LSM10Q969L4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LSM10Q969L4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 SLC47A1P1-202ENST00000449666 945 ntBASIC17■□□□□ 0.31
LSM10Q969L4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17■□□□□ 0.31
LSM10Q969L4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LSM10Q969L4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17■□□□□ 0.31
LSM10Q969L4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM10Q969L4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.99■□□□□ 0.31
LSM10Q969L4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LSM10Q969L4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM10Q969L4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM10Q969L4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM10Q969L4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.99■□□□□ 0.31
LSM10Q969L4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.99■□□□□ 0.31
LSM10Q969L4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM10Q969L4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM10Q969L4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
LSM10Q969L4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LSM10Q969L4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
LSM10Q969L4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LSM10Q969L4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
LSM10Q969L4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.98■□□□□ 0.31
LSM10Q969L4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
LSM10Q969L4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.98■□□□□ 0.31
LSM10Q969L4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LSM10Q969L4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LSM10Q969L4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM10Q969L4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
LSM10Q969L4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LSM10Q969L4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LSM10Q969L4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
LSM10Q969L4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.97■□□□□ 0.31
LSM10Q969L4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM10Q969L4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM10Q969L4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.97■□□□□ 0.31
LSM10Q969L4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LSM10Q969L4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LSM10Q969L4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM10Q969L4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
LSM10Q969L4 AC007225.1-201ENST00000566331 1836 ntBASIC16.97■□□□□ 0.31
LSM10Q969L4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LSM10Q969L4 AC020907.5-201ENST00000624372 1936 ntBASIC16.97■□□□□ 0.31
LSM10Q969L4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM10Q969L4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms