Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 AC007225.1-201ENST00000566331 1836 ntBASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC44A1Q8WWI5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 MIR4767-201ENST00000582827 78 ntBASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC44A1Q8WWI5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
SLC44A1Q8WWI5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 AC020907.5-201ENST00000624372 1936 ntBASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 AC233992.3-201ENST00000607491 485 ntBASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC44A1Q8WWI5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 IGHV3-19-201ENST00000521488 291 ntBASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC44A1Q8WWI5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SLC44A1Q8WWI5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC44A1Q8WWI5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SLC44A1Q8WWI5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC44A1Q8WWI5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SLC44A1Q8WWI5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SLC44A1Q8WWI5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms