Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.15■□□□□ 0.98
PTCD2Q8WV60 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTCD2Q8WV60 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.14■□□□□ 0.98
PTCD2Q8WV60 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PTCD2Q8WV60 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PTCD2Q8WV60 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 EEF1DP3-203ENST00000566025 782 ntBASIC21.13■□□□□ 0.97
PTCD2Q8WV60 AC053503.5-201ENST00000601508 636 ntBASIC21.13■□□□□ 0.97
PTCD2Q8WV60 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PTCD2Q8WV60 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PTCD2Q8WV60 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PTCD2Q8WV60 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 AC104187.1-201ENST00000607510 612 ntBASIC21.1■□□□□ 0.97
PTCD2Q8WV60 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 RARRES2P11-201ENST00000635158 484 ntBASIC21.1■□□□□ 0.97
PTCD2Q8WV60 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PTCD2Q8WV60 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 KRT87P-202ENST00000534226 1464 ntBASIC21.09■□□□□ 0.97
PTCD2Q8WV60 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 AC006015.1-201ENST00000429970 570 ntBASIC21.09■□□□□ 0.97
PTCD2Q8WV60 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 AC137761.2-201ENST00000561729 223 ntBASIC21.09■□□□□ 0.97
PTCD2Q8WV60 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 AC145350.3-201ENST00000569033 163 ntBASIC21.09■□□□□ 0.97
PTCD2Q8WV60 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PTCD2Q8WV60 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms