Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 FAM99A-202ENST00000538190 1989 ntBASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SH3RF2Q8TEC5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 TSPY20P-201ENST00000450910 630 ntBASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF2Q8TEC5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 AC242852.2-201ENST00000615738 1807 ntBASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.74■■□□□ 1.07
SH3RF2Q8TEC5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 AL162412.1-201ENST00000567129 965 ntBASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3RF2Q8TEC5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3RF2Q8TEC5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 BX276092.2-201ENST00000417668 665 ntBASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3RF2Q8TEC5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.7■■□□□ 1.07
SH3RF2Q8TEC5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 RARRES2P4-201ENST00000514074 484 ntBASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 MIR4651-201ENST00000582622 73 ntBASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 TMEM191A-211ENST00000637163 1067 ntBASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 C11orf96-202ENST00000528572 1834 ntBASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3RF2Q8TEC5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3RF2Q8TEC5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms