Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB3IL1Q8TBN0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 MIR6724-1-201ENST00000616420 92 ntBASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 MIR6724-2-201ENST00000616483 92 ntBASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 MIR6724-4-201ENST00000617390 92 ntBASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 MIR6724-3-201ENST00000622482 92 ntBASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB3IL1Q8TBN0 AC073314.1-201ENST00000568729 2216 ntBASIC20.77■□□□□ 0.91
RAB3IL1Q8TBN0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3IL1Q8TBN0 HCG11-201ENST00000411553 5696 ntBASIC20.77■□□□□ 0.91
RAB3IL1Q8TBN0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3IL1Q8TBN0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3IL1Q8TBN0 AP004607.7-201ENST00000527152 1677 ntBASIC20.77■□□□□ 0.91
RAB3IL1Q8TBN0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3IL1Q8TBN0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB3IL1Q8TBN0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB3IL1Q8TBN0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB3IL1Q8TBN0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 PLK5-205ENST00000642079 1969 ntBASIC20.74■□□□□ 0.91
RAB3IL1Q8TBN0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 MIR3181-201ENST00000578512 73 ntBASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB3IL1Q8TBN0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms