Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 KRT87P-202ENST00000534226 1464 ntBASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SMARCC2Q8TAQ2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SMARCC2Q8TAQ2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
SMARCC2Q8TAQ2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 KRT19P1-201ENST00000405746 1186 ntBASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 EEF1DP3-203ENST00000566025 782 ntBASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 AL137784.2-201ENST00000607332 1000 ntBASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SMARCC2Q8TAQ2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMARCC2Q8TAQ2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 AC092437.1-201ENST00000624794 1048 ntBASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
SMARCC2Q8TAQ2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
SMARCC2Q8TAQ2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 AC137761.2-201ENST00000561729 223 ntBASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 AC145350.3-201ENST00000569033 163 ntBASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.45■■□□□ 1.5
SMARCC2Q8TAQ2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 AC104187.1-201ENST00000607510 612 ntBASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMARCC2Q8TAQ2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms