Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.32■□□□□ 0.52
DNAAF1Q8NEP3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 PCDHAC2-203ENST00000615316 3011 ntBASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 AP004607.7-201ENST00000527152 1677 ntBASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
DNAAF1Q8NEP3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DNAAF1Q8NEP3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 AL136116.3-201ENST00000402907 1138 ntBASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
DNAAF1Q8NEP3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 BX842568.3-201ENST00000418104 571 ntBASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DNAAF1Q8NEP3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 AC073314.1-201ENST00000568729 2216 ntBASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DNAAF1Q8NEP3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms