Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 POU5F1P4-201ENST00000413175 1085 ntBASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 AL162430.1-201ENST00000480705 870 ntBASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNRF1Q8ND25 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNRF1Q8ND25 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 SLC7A5P2-201ENST00000553010 536 ntBASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNRF1Q8ND25 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZNRF1Q8ND25 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 AC120498.10-201ENST00000621827 505 ntBASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
ZNRF1Q8ND25 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNRF1Q8ND25 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms