Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSMEM1Q8N8F7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 MIR6084-201ENST00000622012 110 ntBASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
LSMEM1Q8N8F7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LSMEM1Q8N8F7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.08■□□□□ 0.65
LSMEM1Q8N8F7 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 KRT87P-202ENST00000534226 1464 ntBASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSMEM1Q8N8F7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 AC079140.4-201ENST00000507448 529 ntBASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.07■□□□□ 0.64
LSMEM1Q8N8F7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LSMEM1Q8N8F7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms