Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TTC39CQ8N584 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TTC39CQ8N584 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.27■■□□□ 1.16
TTC39CQ8N584 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TTC39CQ8N584 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TTC39CQ8N584 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC39CQ8N584 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC39CQ8N584 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC39CQ8N584 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TTC39CQ8N584 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC39CQ8N584 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC39CQ8N584 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC39CQ8N584 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC39CQ8N584 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.26■■□□□ 1.15
TTC39CQ8N584 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC39CQ8N584 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC39CQ8N584 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC39CQ8N584 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC39CQ8N584 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TTC39CQ8N584 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.25■■□□□ 1.15
TTC39CQ8N584 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
TTC39CQ8N584 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TTC39CQ8N584 BID-214ENST00000617586 542 ntTSL 5 BASIC22.25■■□□□ 1.15
TTC39CQ8N584 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TTC39CQ8N584 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC39CQ8N584 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TTC39CQ8N584 RBM17P2-201ENST00000616397 1405 ntBASIC22.24■■□□□ 1.15
TTC39CQ8N584 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39CQ8N584 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.24■■□□□ 1.15
TTC39CQ8N584 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC39CQ8N584 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC39CQ8N584 AC010536.3-201ENST00000620306 533 ntBASIC22.24■■□□□ 1.15
TTC39CQ8N584 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.24■■□□□ 1.15
TTC39CQ8N584 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TTC39CQ8N584 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TTC39CQ8N584 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39CQ8N584 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TTC39CQ8N584 FEM1AP4-201ENST00000443167 1987 ntBASIC22.23■■□□□ 1.15
TTC39CQ8N584 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TTC39CQ8N584 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.23■■□□□ 1.15
TTC39CQ8N584 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.23■■□□□ 1.15
TTC39CQ8N584 AL137784.2-201ENST00000607332 1000 ntBASIC22.23■■□□□ 1.15
TTC39CQ8N584 RARRES2P11-201ENST00000635158 484 ntBASIC22.23■■□□□ 1.15
TTC39CQ8N584 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
TTC39CQ8N584 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39CQ8N584 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.22■■□□□ 1.15
TTC39CQ8N584 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39CQ8N584 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39CQ8N584 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39CQ8N584 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39CQ8N584 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.22■■□□□ 1.15
TTC39CQ8N584 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC39CQ8N584 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC39CQ8N584 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39CQ8N584 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC39CQ8N584 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39CQ8N584 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39CQ8N584 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39CQ8N584 AL049796.1-201ENST00000565336 1766 ntBASIC22.22■■□□□ 1.15
TTC39CQ8N584 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39CQ8N584 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
TTC39CQ8N584 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39CQ8N584 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TTC39CQ8N584 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TTC39CQ8N584 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39CQ8N584 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39CQ8N584 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39CQ8N584 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39CQ8N584 TERF1P5-201ENST00000477545 1207 ntBASIC22.21■■□□□ 1.15
TTC39CQ8N584 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
TTC39CQ8N584 MFSD11-216ENST00000590393 1141 ntBASIC22.21■■□□□ 1.15
TTC39CQ8N584 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.21■■□□□ 1.15
TTC39CQ8N584 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.21■■□□□ 1.15
TTC39CQ8N584 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39CQ8N584 AC026310.3-201ENST00000625186 2373 ntBASIC22.21■■□□□ 1.15
TTC39CQ8N584 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms