Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C9orf40Q8IXQ3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 RBM17P2-201ENST00000616397 1405 ntBASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 TERF1P5-201ENST00000477545 1207 ntBASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C9orf40Q8IXQ3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 CNN2P6-201ENST00000439038 900 ntBASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C9orf40Q8IXQ3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 AC090192.1-201ENST00000517740 490 ntBASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.34■□□□□ 0.69
C9orf40Q8IXQ3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf40Q8IXQ3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.33■□□□□ 0.69
C9orf40Q8IXQ3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.33■□□□□ 0.69
C9orf40Q8IXQ3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf40Q8IXQ3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C9orf40Q8IXQ3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 AC245052.3-201ENST00000450182 901 ntBASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 AC243732.1-201ENST00000612648 864 ntBASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 AC231657.2-201ENST00000624556 255 ntBASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 AC013268.1-206ENST00000638368 961 ntBASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 AC112229.1-201ENST00000639295 961 ntBASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C9orf40Q8IXQ3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 AC026185.1-201ENST00000445748 174 ntBASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.32■□□□□ 0.68
C9orf40Q8IXQ3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C9orf40Q8IXQ3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms