Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 AC006015.1-201ENST00000429970 570 ntBASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22■■□□□ 1.11
SCUBE3Q8IX30 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SCUBE3Q8IX30 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SCUBE3Q8IX30 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE3Q8IX30 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE3Q8IX30 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE3Q8IX30 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE3Q8IX30 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE3Q8IX30 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE3Q8IX30 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SCUBE3Q8IX30 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SCUBE3Q8IX30 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SCUBE3Q8IX30 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22■■□□□ 1.11
SCUBE3Q8IX30 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22■■□□□ 1.11
SCUBE3Q8IX30 AC092437.1-201ENST00000624794 1048 ntBASIC22■■□□□ 1.11
SCUBE3Q8IX30 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22■■□□□ 1.11
SCUBE3Q8IX30 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SCUBE3Q8IX30 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SCUBE3Q8IX30 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 CLDN5-201ENST00000403084 2357 ntBASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 AC005229.4-201ENST00000610085 2198 ntBASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SCUBE3Q8IX30 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 MYCNOS-205ENST00000641950 531 ntBASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SCUBE3Q8IX30 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 SLC7A5P1-201ENST00000568957 537 ntBASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SCUBE3Q8IX30 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SCUBE3Q8IX30 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SCUBE3Q8IX30 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SCUBE3Q8IX30 KRT18P11-201ENST00000435214 1283 ntBASIC21.96■■□□□ 1.11
SCUBE3Q8IX30 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.96■■□□□ 1.11
SCUBE3Q8IX30 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.96■■□□□ 1.11
SCUBE3Q8IX30 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.96■■□□□ 1.11
SCUBE3Q8IX30 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SCUBE3Q8IX30 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SCUBE3Q8IX30 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SCUBE3Q8IX30 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SCUBE3Q8IX30 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SCUBE3Q8IX30 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SCUBE3Q8IX30 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms