Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 GABARAPL3-202ENST00000624044 1851 ntBASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 AP001330.3-201ENST00000520123 633 ntBASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 AL136967.2-201ENST00000623968 743 ntBASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CRLF3Q8IUI8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 ZNRF2P3-201ENST00000424200 374 ntBASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 pRNA.6-201ENST00000610482 90 ntBASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 pRNA.5-201ENST00000612139 90 ntBASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 pRNA.11-201ENST00000618423 90 ntBASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 pRNA.13-201ENST00000619112 90 ntBASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CRLF3Q8IUI8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 MIR939-201ENST00000401314 82 ntBASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 AL034346.1-201ENST00000568244 1277 ntBASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 MIR3181-201ENST00000578512 73 ntBASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.78■□□□□ 0.92
CRLF3Q8IUI8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CRLF3Q8IUI8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CRLF3Q8IUI8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.77■□□□□ 0.91
CRLF3Q8IUI8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 AC136469.2-201ENST00000623944 1028 ntBASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 AC003102.1-202ENST00000563394 1796 ntBASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 AC006128.1-201ENST00000624704 1661 ntBASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 AP005212.1-201ENST00000581547 1997 ntBASIC20.76■□□□□ 0.91
CRLF3Q8IUI8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CRLF3Q8IUI8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms