Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC28Q86X40 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC28Q86X40 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LRRC28Q86X40 ZNRF2P3-201ENST00000424200 374 ntBASIC18.53■□□□□ 0.56
LRRC28Q86X40 SLC47A1P1-202ENST00000449666 945 ntBASIC18.53■□□□□ 0.56
LRRC28Q86X40 OR2I1P-207ENST00000453522 948 ntBASIC18.53■□□□□ 0.56
LRRC28Q86X40 AC105265.2-201ENST00000467189 838 ntBASIC18.53■□□□□ 0.56
LRRC28Q86X40 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC28Q86X40 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC28Q86X40 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC28Q86X40 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRRC28Q86X40 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC28Q86X40 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC28Q86X40 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC28Q86X40 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC28Q86X40 AL049796.1-201ENST00000565336 1766 ntBASIC18.53■□□□□ 0.56
LRRC28Q86X40 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC28Q86X40 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC28Q86X40 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC28Q86X40 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
LRRC28Q86X40 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC28Q86X40 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC28Q86X40 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC28Q86X40 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC28Q86X40 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC28Q86X40 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC28Q86X40 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC28Q86X40 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC28Q86X40 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC28Q86X40 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC28Q86X40 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
LRRC28Q86X40 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.52■□□□□ 0.55
LRRC28Q86X40 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.52■□□□□ 0.55
LRRC28Q86X40 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC28Q86X40 AC026471.6-201ENST00000622954 1905 ntBASIC18.51■□□□□ 0.55
LRRC28Q86X40 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC28Q86X40 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC28Q86X40 AC126544.1-201ENST00000580842 1059 ntBASIC18.51■□□□□ 0.55
LRRC28Q86X40 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC28Q86X40 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC28Q86X40 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LRRC28Q86X40 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC28Q86X40 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC28Q86X40 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC28Q86X40 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC28Q86X40 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC28Q86X40 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC28Q86X40 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC28Q86X40 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC28Q86X40 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC28Q86X40 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC28Q86X40 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.5■□□□□ 0.55
LRRC28Q86X40 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC28Q86X40 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC28Q86X40 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRC28Q86X40 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC28Q86X40 AP005212.1-201ENST00000581547 1997 ntBASIC18.5■□□□□ 0.55
LRRC28Q86X40 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRRC28Q86X40 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
LRRC28Q86X40 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms