Protein–RNA interactions for Protein: Q86VQ0

LCA5, Lebercilin, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5Q86VQ0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCA5Q86VQ0 AC007952.6-201ENST00000573168 2673 ntBASIC20.78■□□□□ 0.92
LCA5Q86VQ0 AC003957.1-201ENST00000625108 2673 ntBASIC20.78■□□□□ 0.92
LCA5Q86VQ0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCA5Q86VQ0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LCA5Q86VQ0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LCA5Q86VQ0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LCA5Q86VQ0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.77■□□□□ 0.91
LCA5Q86VQ0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LCA5Q86VQ0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 AC233992.3-201ENST00000607491 485 ntBASIC20.75■□□□□ 0.91
LCA5Q86VQ0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.75■□□□□ 0.91
LCA5Q86VQ0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCA5Q86VQ0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LCA5Q86VQ0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 IGHV3-19-201ENST00000521488 291 ntBASIC20.73■□□□□ 0.91
LCA5Q86VQ0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LCA5Q86VQ0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms