Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 CNN2P6-201ENST00000439038 900 ntBASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 AC245052.3-201ENST00000450182 901 ntBASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 AC243732.1-201ENST00000612648 864 ntBASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRTM4Q86VH4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 AC079834.2-201ENST00000609776 1949 ntBASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRTM4Q86VH4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 MIR663A-201ENST00000385250 93 ntBASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 CROCCP5-201ENST00000436658 830 ntBASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 AC006970.2-201ENST00000450065 779 ntBASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 AC007322.4-201ENST00000509611 723 ntBASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRTM4Q86VH4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 AC005181.1-201ENST00000604782 1256 ntBASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRTM4Q86VH4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRTM4Q86VH4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRTM4Q86VH4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRTM4Q86VH4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRTM4Q86VH4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms