Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRTM1Q86UE6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 AC007225.1-201ENST00000566331 1836 ntBASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 AC020907.5-201ENST00000624372 1936 ntBASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 SLC47A1P1-202ENST00000449666 945 ntBASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 AL512631.2-201ENST00000604634 923 ntBASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRTM1Q86UE6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 SERBP1P1-201ENST00000396021 1160 ntBASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 AL138724.1-201ENST00000606771 1088 ntBASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LRRTM1Q86UE6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 AFG3L1P-217ENST00000557444 2447 ntBASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRTM1Q86UE6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 AC136469.2-201ENST00000623944 1028 ntBASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM1Q86UE6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRTM1Q86UE6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRTM1Q86UE6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRTM1Q86UE6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
LRRTM1Q86UE6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRTM1Q86UE6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
LRRTM1Q86UE6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRTM1Q86UE6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM1Q86UE6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms