Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDB1Q86U70 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDB1Q86U70 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDB1Q86U70 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LDB1Q86U70 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LDB1Q86U70 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LDB1Q86U70 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LDB1Q86U70 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.84■□□□□ 0.93
LDB1Q86U70 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
LDB1Q86U70 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LDB1Q86U70 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LDB1Q86U70 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LDB1Q86U70 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LDB1Q86U70 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.84■□□□□ 0.93
LDB1Q86U70 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.84■□□□□ 0.93
LDB1Q86U70 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LDB1Q86U70 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LDB1Q86U70 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.83■□□□□ 0.93
LDB1Q86U70 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LDB1Q86U70 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
LDB1Q86U70 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LDB1Q86U70 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
LDB1Q86U70 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LDB1Q86U70 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.83■□□□□ 0.93
LDB1Q86U70 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.83■□□□□ 0.93
LDB1Q86U70 AC104187.1-201ENST00000607510 612 ntBASIC20.83■□□□□ 0.93
LDB1Q86U70 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LDB1Q86U70 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LDB1Q86U70 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LDB1Q86U70 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LDB1Q86U70 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.83■□□□□ 0.92
LDB1Q86U70 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LDB1Q86U70 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
LDB1Q86U70 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LDB1Q86U70 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LDB1Q86U70 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LDB1Q86U70 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LDB1Q86U70 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.82■□□□□ 0.92
LDB1Q86U70 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LDB1Q86U70 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LDB1Q86U70 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 AC004854.2-201ENST00000608450 1441 ntBASIC20.81■□□□□ 0.92
LDB1Q86U70 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LDB1Q86U70 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
LDB1Q86U70 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.81■□□□□ 0.92
LDB1Q86U70 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 KRT18P61-201ENST00000585825 1298 ntBASIC20.81■□□□□ 0.92
LDB1Q86U70 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.81■□□□□ 0.92
LDB1Q86U70 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.81■□□□□ 0.92
LDB1Q86U70 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.81■□□□□ 0.92
LDB1Q86U70 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LDB1Q86U70 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDB1Q86U70 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LDB1Q86U70 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LDB1Q86U70 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.8■□□□□ 0.92
LDB1Q86U70 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.8■□□□□ 0.92
LDB1Q86U70 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.8■□□□□ 0.92
LDB1Q86U70 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.8■□□□□ 0.92
LDB1Q86U70 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.8■□□□□ 0.92
LDB1Q86U70 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LDB1Q86U70 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LDB1Q86U70 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDB1Q86U70 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LDB1Q86U70 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDB1Q86U70 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDB1Q86U70 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDB1Q86U70 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.79■□□□□ 0.92
LDB1Q86U70 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LDB1Q86U70 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LDB1Q86U70 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
LDB1Q86U70 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms