Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
DEPDC1Q5TB30 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.19■□□□□ 0.82
DEPDC1Q5TB30 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 AC123595.1-201ENST00000440769 1046 ntBASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DEPDC1Q5TB30 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 LINC02228-203ENST00000641970 1355 ntBASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.17■□□□□ 0.82
DEPDC1Q5TB30 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DEPDC1Q5TB30 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 AF106564.1-201ENST00000607058 2553 ntBASIC20.15■□□□□ 0.82
DEPDC1Q5TB30 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1Q5TB30 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1Q5TB30 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1Q5TB30 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1Q5TB30 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1Q5TB30 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1Q5TB30 YBX1P1-201ENST00000445822 960 ntBASIC20.14■□□□□ 0.81
DEPDC1Q5TB30 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms