Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 AC027702.1-201ENST00000563810 1770 ntBASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 AL356740.2-201ENST00000601559 647 ntBASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00242Q5T6M2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00242Q5T6M2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00242Q5T6M2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LINC00242Q5T6M2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00242Q5T6M2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00242Q5T6M2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00242Q5T6M2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00242Q5T6M2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 KRT16P3-201ENST00000439127 1283 ntBASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 SRD5A1P1-201ENST00000442297 786 ntBASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
LINC00242Q5T6M2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 AFG3L1P-217ENST00000557444 2447 ntBASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 AC020907.5-201ENST00000624372 1936 ntBASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 RARRES2P1-201ENST00000474487 481 ntBASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 AP005435.1-201ENST00000529293 1178 ntBASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LINC00242Q5T6M2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 AC007225.1-201ENST00000566331 1836 ntBASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00242Q5T6M2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms