Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 AC131281.2-201ENST00000520478 145 ntBASIC20.05■□□□□ 0.8
PDCD4Q53EL6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDCD4Q53EL6 AC073314.1-201ENST00000568729 2216 ntBASIC20.04■□□□□ 0.8
PDCD4Q53EL6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 AC121338.2-201ENST00000622535 1744 ntBASIC20.04■□□□□ 0.8
PDCD4Q53EL6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDCD4Q53EL6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 AC009237.3-201ENST00000393279 1427 ntBASIC20.03■□□□□ 0.8
PDCD4Q53EL6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDCD4Q53EL6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDCD4Q53EL6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
PDCD4Q53EL6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDCD4Q53EL6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
PDCD4Q53EL6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDCD4Q53EL6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.02■□□□□ 0.79
PDCD4Q53EL6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 AC055733.4-201ENST00000638462 1354 ntBASIC20.01■□□□□ 0.79
PDCD4Q53EL6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDCD4Q53EL6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20■□□□□ 0.79
PDCD4Q53EL6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PDCD4Q53EL6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20■□□□□ 0.79
PDCD4Q53EL6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PDCD4Q53EL6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDCD4Q53EL6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms