Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.86■□□□□ 0.77
SKP1P63208 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.86■□□□□ 0.77
SKP1P63208 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.85■□□□□ 0.77
SKP1P63208 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 AC245052.3-201ENST00000450182 901 ntBASIC19.85■□□□□ 0.77
SKP1P63208 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.85■□□□□ 0.77
SKP1P63208 AC061975.6-201ENST00000579045 1553 ntBASIC19.85■□□□□ 0.77
SKP1P63208 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SKP1P63208 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SKP1P63208 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SKP1P63208 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SKP1P63208 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.84■□□□□ 0.77
SKP1P63208 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.84■□□□□ 0.77
SKP1P63208 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.84■□□□□ 0.77
SKP1P63208 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.84■□□□□ 0.77
SKP1P63208 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SKP1P63208 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SKP1P63208 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SKP1P63208 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SKP1P63208 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SKP1P63208 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SKP1P63208 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SKP1P63208 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
SKP1P63208 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SKP1P63208 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SKP1P63208 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SKP1P63208 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
SKP1P63208 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SKP1P63208 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.83■□□□□ 0.77
SKP1P63208 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.83■□□□□ 0.77
SKP1P63208 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SKP1P63208 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.83■□□□□ 0.77
SKP1P63208 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SKP1P63208 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.83■□□□□ 0.77
SKP1P63208 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SKP1P63208 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SKP1P63208 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SKP1P63208 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SKP1P63208 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SKP1P63208 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SKP1P63208 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SKP1P63208 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.82■□□□□ 0.76
SKP1P63208 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.82■□□□□ 0.76
SKP1P63208 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.82■□□□□ 0.76
SKP1P63208 SLC7A5P2-201ENST00000553010 536 ntBASIC19.82■□□□□ 0.76
SKP1P63208 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.82■□□□□ 0.76
SKP1P63208 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.82■□□□□ 0.76
SKP1P63208 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SKP1P63208 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.82■□□□□ 0.76
SKP1P63208 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SKP1P63208 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.82■□□□□ 0.76
SKP1P63208 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.82■□□□□ 0.76
SKP1P63208 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SKP1P63208 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.81■□□□□ 0.76
SKP1P63208 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.81■□□□□ 0.76
SKP1P63208 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.81■□□□□ 0.76
SKP1P63208 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
SKP1P63208 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.81■□□□□ 0.76
SKP1P63208 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 AC243732.1-201ENST00000612648 864 ntBASIC19.81■□□□□ 0.76
SKP1P63208 AC011767.1-201ENST00000617410 1153 ntBASIC19.81■□□□□ 0.76
SKP1P63208 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.81■□□□□ 0.76
SKP1P63208 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SKP1P63208 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms