Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PER3P56645 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PER3P56645 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PER3P56645 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.25■□□□□ 0.67
PER3P56645 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PER3P56645 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PER3P56645 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PER3P56645 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PER3P56645 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.25■□□□□ 0.67
PER3P56645 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.25■□□□□ 0.67
PER3P56645 AC105036.2-201ENST00000569468 176 ntBASIC19.25■□□□□ 0.67
PER3P56645 AC133552.2-202ENST00000575694 574 ntBASIC19.25■□□□□ 0.67
PER3P56645 MIR4758-201ENST00000577688 71 ntBASIC19.25■□□□□ 0.67
PER3P56645 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PER3P56645 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PER3P56645 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PER3P56645 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PER3P56645 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PER3P56645 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.25■□□□□ 0.67
PER3P56645 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PER3P56645 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PER3P56645 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.24■□□□□ 0.67
PER3P56645 POU5F1P3-201ENST00000428824 1078 ntBASIC19.24■□□□□ 0.67
PER3P56645 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PER3P56645 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.24■□□□□ 0.67
PER3P56645 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.24■□□□□ 0.67
PER3P56645 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.24■□□□□ 0.67
PER3P56645 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PER3P56645 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PER3P56645 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PER3P56645 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.23■□□□□ 0.67
PER3P56645 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
PER3P56645 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PER3P56645 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.23■□□□□ 0.67
PER3P56645 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 AP001160.3-201ENST00000601484 763 ntBASIC19.23■□□□□ 0.67
PER3P56645 ITM2C-210ENST00000620962 501 ntBASIC19.23■□□□□ 0.67
PER3P56645 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PER3P56645 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PER3P56645 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
PER3P56645 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PER3P56645 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PER3P56645 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.22■□□□□ 0.67
PER3P56645 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PER3P56645 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.22■□□□□ 0.67
PER3P56645 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PER3P56645 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PER3P56645 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PER3P56645 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.22■□□□□ 0.67
PER3P56645 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.22■□□□□ 0.67
PER3P56645 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.22■□□□□ 0.67
PER3P56645 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PER3P56645 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PER3P56645 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PER3P56645 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
PER3P56645 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PER3P56645 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PER3P56645 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PER3P56645 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PER3P56645 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PER3P56645 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.21■□□□□ 0.67
PER3P56645 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PER3P56645 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PER3P56645 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PER3P56645 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PER3P56645 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.21■□□□□ 0.67
PER3P56645 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.21■□□□□ 0.67
PER3P56645 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PER3P56645 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PER3P56645 AC079089.2-201ENST00000531211 1277 ntBASIC19.21■□□□□ 0.67
PER3P56645 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PER3P56645 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PER3P56645 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PER3P56645 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.21■□□□□ 0.67
PER3P56645 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.21■□□□□ 0.67
PER3P56645 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PER3P56645 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PER3P56645 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms