Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PSMD4P55036 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.43■□□□□ 0.7
PSMD4P55036 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PSMD4P55036 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PSMD4P55036 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PSMD4P55036 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PSMD4P55036 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PSMD4P55036 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.43■□□□□ 0.7
PSMD4P55036 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.43■□□□□ 0.7
PSMD4P55036 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PSMD4P55036 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.43■□□□□ 0.7
PSMD4P55036 POU5F1P4-201ENST00000413175 1085 ntBASIC19.43■□□□□ 0.7
PSMD4P55036 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.43■□□□□ 0.7
PSMD4P55036 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.43■□□□□ 0.7
PSMD4P55036 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.43■□□□□ 0.7
PSMD4P55036 RARRES2P6-201ENST00000567333 442 ntBASIC19.43■□□□□ 0.7
PSMD4P55036 AC138907.5-202ENST00000569484 235 ntBASIC19.43■□□□□ 0.7
PSMD4P55036 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.43■□□□□ 0.7
PSMD4P55036 AC120498.10-201ENST00000621827 505 ntBASIC19.43■□□□□ 0.7
PSMD4P55036 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.43■□□□□ 0.7
PSMD4P55036 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.43■□□□□ 0.7
PSMD4P55036 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PSMD4P55036 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PSMD4P55036 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PSMD4P55036 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMD4P55036 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMD4P55036 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.42■□□□□ 0.7
PSMD4P55036 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.42■□□□□ 0.7
PSMD4P55036 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PSMD4P55036 KRT19P1-201ENST00000405746 1186 ntBASIC19.42■□□□□ 0.7
PSMD4P55036 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.42■□□□□ 0.7
PSMD4P55036 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.42■□□□□ 0.7
PSMD4P55036 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.42■□□□□ 0.7
PSMD4P55036 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.42■□□□□ 0.7
PSMD4P55036 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.42■□□□□ 0.7
PSMD4P55036 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMD4P55036 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PSMD4P55036 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMD4P55036 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PSMD4P55036 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.42■□□□□ 0.7
PSMD4P55036 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMD4P55036 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PSMD4P55036 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.42■□□□□ 0.7
PSMD4P55036 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PSMD4P55036 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PSMD4P55036 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMD4P55036 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.41■□□□□ 0.7
PSMD4P55036 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMD4P55036 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PSMD4P55036 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PSMD4P55036 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PSMD4P55036 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.41■□□□□ 0.7
PSMD4P55036 DUX4L2-201ENST00000561772 1275 ntBASIC19.41■□□□□ 0.7
PSMD4P55036 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.41■□□□□ 0.7
PSMD4P55036 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.41■□□□□ 0.7
PSMD4P55036 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
PSMD4P55036 DUX4L6-201ENST00000626483 1275 ntBASIC19.41■□□□□ 0.7
PSMD4P55036 DUX4L1-201ENST00000627662 1275 ntBASIC19.41■□□□□ 0.7
PSMD4P55036 DUX4L8-201ENST00000629013 1275 ntBASIC19.41■□□□□ 0.7
PSMD4P55036 DUX4L3-201ENST00000630187 1275 ntBASIC19.41■□□□□ 0.7
PSMD4P55036 DUX4L7-201ENST00000630678 1275 ntBASIC19.41■□□□□ 0.7
PSMD4P55036 DUX4L5-201ENST00000630834 1275 ntBASIC19.41■□□□□ 0.7
PSMD4P55036 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PSMD4P55036 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PSMD4P55036 FEM1AP4-201ENST00000443167 1987 ntBASIC19.41■□□□□ 0.7
PSMD4P55036 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMD4P55036 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMD4P55036 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PSMD4P55036 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMD4P55036 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMD4P55036 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PSMD4P55036 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PSMD4P55036 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PSMD4P55036 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PSMD4P55036 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.4■□□□□ 0.7
PSMD4P55036 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.4■□□□□ 0.7
PSMD4P55036 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMD4P55036 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PSMD4P55036 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.4■□□□□ 0.7
PSMD4P55036 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
PSMD4P55036 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.4■□□□□ 0.7
PSMD4P55036 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMD4P55036 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PSMD4P55036 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PSMD4P55036 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PSMD4P55036 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PSMD4P55036 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSMD4P55036 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PSMD4P55036 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSMD4P55036 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.39■□□□□ 0.69
PSMD4P55036 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.39■□□□□ 0.69
PSMD4P55036 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.39■□□□□ 0.69
PSMD4P55036 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.39■□□□□ 0.69
PSMD4P55036 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PSMD4P55036 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PSMD4P55036 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PSMD4P55036 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.39■□□□□ 0.69
PSMD4P55036 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PSMD4P55036 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.39■□□□□ 0.69
PSMD4P55036 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms