Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA4P54764 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.17■□□□□ 0.82
EPHA4P54764 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.17■□□□□ 0.82
EPHA4P54764 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHA4P54764 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.17■□□□□ 0.82
EPHA4P54764 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
EPHA4P54764 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.17■□□□□ 0.82
EPHA4P54764 C11orf96-202ENST00000528572 1834 ntBASIC20.17■□□□□ 0.82
EPHA4P54764 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA4P54764 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA4P54764 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA4P54764 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.17■□□□□ 0.82
EPHA4P54764 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA4P54764 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA4P54764 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EPHA4P54764 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.17■□□□□ 0.82
EPHA4P54764 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA4P54764 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA4P54764 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA4P54764 GUSBP5-202ENST00000510805 1989 ntBASIC20.16■□□□□ 0.82
EPHA4P54764 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA4P54764 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA4P54764 AC091799.1-201ENST00000422823 811 ntBASIC20.16■□□□□ 0.82
EPHA4P54764 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
EPHA4P54764 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.16■□□□□ 0.82
EPHA4P54764 FAM21FP-204ENST00000608637 956 ntBASIC20.16■□□□□ 0.82
EPHA4P54764 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA4P54764 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.16■□□□□ 0.82
EPHA4P54764 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA4P54764 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.16■□□□□ 0.82
EPHA4P54764 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.16■□□□□ 0.82
EPHA4P54764 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPHA4P54764 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA4P54764 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
EPHA4P54764 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
EPHA4P54764 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA4P54764 CDV3P1-201ENST00000471403 739 ntBASIC20.15■□□□□ 0.82
EPHA4P54764 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.15■□□□□ 0.82
EPHA4P54764 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA4P54764 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.15■□□□□ 0.82
EPHA4P54764 AC010980.2-201ENST00000587099 1412 ntBASIC20.15■□□□□ 0.82
EPHA4P54764 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
EPHA4P54764 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA4P54764 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA4P54764 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA4P54764 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA4P54764 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EPHA4P54764 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.15■□□□□ 0.82
EPHA4P54764 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA4P54764 AC233723.2-201ENST00000623798 2106 ntBASIC20.14■□□□□ 0.81
EPHA4P54764 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA4P54764 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.14■□□□□ 0.81
EPHA4P54764 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA4P54764 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
EPHA4P54764 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA4P54764 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA4P54764 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.14■□□□□ 0.81
EPHA4P54764 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.14■□□□□ 0.81
EPHA4P54764 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.14■□□□□ 0.81
EPHA4P54764 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.14■□□□□ 0.81
EPHA4P54764 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPHA4P54764 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
EPHA4P54764 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA4P54764 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
EPHA4P54764 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA4P54764 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA4P54764 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
EPHA4P54764 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA4P54764 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.13■□□□□ 0.81
EPHA4P54764 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.13■□□□□ 0.81
EPHA4P54764 BX276092.2-201ENST00000417668 665 ntBASIC20.13■□□□□ 0.81
EPHA4P54764 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.13■□□□□ 0.81
EPHA4P54764 AC098934.4-201ENST00000564127 592 ntBASIC20.13■□□□□ 0.81
EPHA4P54764 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
EPHA4P54764 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHA4P54764 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA4P54764 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA4P54764 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
EPHA4P54764 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
EPHA4P54764 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA4P54764 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA4P54764 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
EPHA4P54764 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHA4P54764 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
EPHA4P54764 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
EPHA4P54764 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA4P54764 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHA4P54764 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHA4P54764 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHA4P54764 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHA4P54764 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHA4P54764 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.12■□□□□ 0.81
EPHA4P54764 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA4P54764 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA4P54764 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
EPHA4P54764 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
EPHA4P54764 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHA4P54764 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
EPHA4P54764 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHA4P54764 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms