Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ZNF140P52738 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF140P52738 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF140P52738 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
ZNF140P52738 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF140P52738 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF140P52738 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF140P52738 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.85■□□□□ 0.93
ZNF140P52738 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF140P52738 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ZNF140P52738 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
ZNF140P52738 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ZNF140P52738 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNF140P52738 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF140P52738 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNF140P52738 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ZNF140P52738 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.84■□□□□ 0.93
ZNF140P52738 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.84■□□□□ 0.93
ZNF140P52738 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNF140P52738 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 MIR5787-201ENST00000611784 55 ntBASIC20.84■□□□□ 0.93
ZNF140P52738 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ZNF140P52738 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF140P52738 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF140P52738 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF140P52738 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
ZNF140P52738 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF140P52738 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.83■□□□□ 0.93
ZNF140P52738 UBE2DNL-204ENST00000602536 740 ntBASIC20.83■□□□□ 0.93
ZNF140P52738 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.83■□□□□ 0.93
ZNF140P52738 RARRES2P11-201ENST00000635158 484 ntBASIC20.83■□□□□ 0.93
ZNF140P52738 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF140P52738 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ZNF140P52738 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ZNF140P52738 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.83■□□□□ 0.92
ZNF140P52738 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.83■□□□□ 0.92
ZNF140P52738 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF140P52738 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF140P52738 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF140P52738 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF140P52738 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF140P52738 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF140P52738 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF140P52738 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF140P52738 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF140P52738 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.82■□□□□ 0.92
ZNF140P52738 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF140P52738 AL162430.1-201ENST00000480705 870 ntBASIC20.82■□□□□ 0.92
ZNF140P52738 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.82■□□□□ 0.92
ZNF140P52738 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF140P52738 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF140P52738 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ZNF140P52738 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF140P52738 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF140P52738 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF140P52738 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF140P52738 SLC7A5P1-201ENST00000568957 537 ntBASIC20.81■□□□□ 0.92
ZNF140P52738 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ZNF140P52738 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF140P52738 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.81■□□□□ 0.92
ZNF140P52738 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF140P52738 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF140P52738 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF140P52738 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF140P52738 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.8■□□□□ 0.92
ZNF140P52738 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF140P52738 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF140P52738 AC245052.3-201ENST00000450182 901 ntBASIC20.8■□□□□ 0.92
ZNF140P52738 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF140P52738 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF140P52738 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF140P52738 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF140P52738 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF140P52738 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF140P52738 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF140P52738 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF140P52738 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF140P52738 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF140P52738 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF140P52738 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF140P52738 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms