Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CPT1AP50416 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.29■■□□□ 1.32
CPT1AP50416 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.29■■□□□ 1.32
CPT1AP50416 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.29■■□□□ 1.32
CPT1AP50416 AC073648.6-201ENST00000641589 218 ntBASIC23.29■■□□□ 1.32
CPT1AP50416 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
CPT1AP50416 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.29■■□□□ 1.32
CPT1AP50416 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.28■■□□□ 1.32
CPT1AP50416 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.28■■□□□ 1.32
CPT1AP50416 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
CPT1AP50416 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CPT1AP50416 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
CPT1AP50416 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
CPT1AP50416 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.28■■□□□ 1.32
CPT1AP50416 C1orf229-201ENST00000623686 2258 ntBASIC23.28■■□□□ 1.32
CPT1AP50416 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CPT1AP50416 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPT1AP50416 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPT1AP50416 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPT1AP50416 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPT1AP50416 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
CPT1AP50416 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPT1AP50416 AC007322.3-201ENST00000426526 701 ntBASIC23.27■■□□□ 1.32
CPT1AP50416 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.27■■□□□ 1.32
CPT1AP50416 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CPT1AP50416 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CPT1AP50416 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPT1AP50416 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.27■■□□□ 1.32
CPT1AP50416 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPT1AP50416 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CPT1AP50416 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.27■■□□□ 1.32
CPT1AP50416 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPT1AP50416 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
CPT1AP50416 AC068473.5-201ENST00000616428 2072 ntBASIC23.26■■□□□ 1.31
CPT1AP50416 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CPT1AP50416 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPT1AP50416 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPT1AP50416 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPT1AP50416 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CPT1AP50416 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPT1AP50416 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPT1AP50416 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.26■■□□□ 1.31
CPT1AP50416 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPT1AP50416 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CPT1AP50416 FAM99A-202ENST00000538190 1989 ntBASIC23.26■■□□□ 1.31
CPT1AP50416 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CPT1AP50416 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.26■■□□□ 1.31
CPT1AP50416 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.26■■□□□ 1.31
CPT1AP50416 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CPT1AP50416 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CPT1AP50416 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.26■■□□□ 1.31
CPT1AP50416 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
CPT1AP50416 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CPT1AP50416 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.25■■□□□ 1.31
CPT1AP50416 KRT18P68-201ENST00000392293 1000 ntBASIC23.25■■□□□ 1.31
CPT1AP50416 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.25■■□□□ 1.31
CPT1AP50416 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.25■■□□□ 1.31
CPT1AP50416 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.25■■□□□ 1.31
CPT1AP50416 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CPT1AP50416 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPT1AP50416 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CPT1AP50416 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CPT1AP50416 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CPT1AP50416 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.24■■□□□ 1.31
CPT1AP50416 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.24■■□□□ 1.31
CPT1AP50416 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CPT1AP50416 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.24■■□□□ 1.31
CPT1AP50416 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.24■■□□□ 1.31
CPT1AP50416 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.24■■□□□ 1.31
CPT1AP50416 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.24■■□□□ 1.31
CPT1AP50416 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CPT1AP50416 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CPT1AP50416 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPT1AP50416 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CPT1AP50416 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.23■■□□□ 1.31
CPT1AP50416 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPT1AP50416 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CPT1AP50416 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPT1AP50416 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPT1AP50416 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CPT1AP50416 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms