Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP13P45452 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP13P45452 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP13P45452 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP13P45452 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP13P45452 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP13P45452 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
MMP13P45452 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.68■■□□□ 1.06
MMP13P45452 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP13P45452 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP13P45452 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
MMP13P45452 FEM1AP1-201ENST00000431297 1995 ntBASIC21.68■■□□□ 1.06
MMP13P45452 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP13P45452 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP13P45452 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
MMP13P45452 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.67■■□□□ 1.06
MMP13P45452 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
MMP13P45452 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP13P45452 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP13P45452 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.67■■□□□ 1.06
MMP13P45452 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
MMP13P45452 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
MMP13P45452 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP13P45452 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP13P45452 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.67■■□□□ 1.06
MMP13P45452 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.67■■□□□ 1.06
MMP13P45452 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP13P45452 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP13P45452 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.67■■□□□ 1.06
MMP13P45452 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP13P45452 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP13P45452 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.66■■□□□ 1.06
MMP13P45452 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP13P45452 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.66■■□□□ 1.06
MMP13P45452 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP13P45452 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MMP13P45452 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP13P45452 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP13P45452 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP13P45452 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.66■■□□□ 1.06
MMP13P45452 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.66■■□□□ 1.06
MMP13P45452 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP13P45452 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
MMP13P45452 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP13P45452 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP13P45452 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP13P45452 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
MMP13P45452 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
MMP13P45452 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP13P45452 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP13P45452 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP13P45452 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP13P45452 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.65■■□□□ 1.06
MMP13P45452 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MMP13P45452 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP13P45452 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP13P45452 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP13P45452 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.65■■□□□ 1.06
MMP13P45452 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.65■■□□□ 1.06
MMP13P45452 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.65■■□□□ 1.06
MMP13P45452 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP13P45452 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP13P45452 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP13P45452 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP13P45452 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
MMP13P45452 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
MMP13P45452 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP13P45452 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.65■■□□□ 1.06
MMP13P45452 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MMP13P45452 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
MMP13P45452 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.64■■□□□ 1.06
MMP13P45452 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
MMP13P45452 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
MMP13P45452 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.64■■□□□ 1.06
MMP13P45452 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.64■■□□□ 1.05
MMP13P45452 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
MMP13P45452 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MMP13P45452 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
MMP13P45452 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MMP13P45452 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MMP13P45452 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP13P45452 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.64■■□□□ 1.05
MMP13P45452 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP13P45452 CCDC92B-201ENST00000575506 885 ntBASIC21.64■■□□□ 1.05
MMP13P45452 TERF1P2-201ENST00000583350 1212 ntBASIC21.64■■□□□ 1.05
MMP13P45452 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
MMP13P45452 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.64■■□□□ 1.05
MMP13P45452 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.64■■□□□ 1.05
MMP13P45452 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MMP13P45452 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms