Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 PRP18YGR006W 756 nt2.02□□□□□ -2.09
CUP9P41817 LSM12YHR121W 564 nt2.02□□□□□ -2.09
CUP9P41817 YIL161WYIL161W 708 nt2.02□□□□□ -2.09
CUP9P41817 LSM8YJR022W 330 nt2.02□□□□□ -2.09
CUP9P41817 YLR400WYLR400W 474 nt2.02□□□□□ -2.09
CUP9P41817 YML047W-AYML047W-A 366 nt2.02□□□□□ -2.09
CUP9P41817 PNO1YOR145C 825 nt2.02□□□□□ -2.09
CUP9P41817 SSP2YOR242C 1116 nt2.02□□□□□ -2.09
CUP9P41817 RSA1YPL193W 1146 nt2.02□□□□□ -2.09
CUP9P41817 YPR074W-AYPR074W-A 171 nt2.02□□□□□ -2.09
CUP9P41817 YJR061WYJR061W 2808 nt2.02□□□□□ -2.09
CUP9P41817 ENP2YGR145W 2124 nt2.02□□□□□ -2.09
CUP9P41817 SPF1YEL031W 3648 nt2.02□□□□□ -2.09
CUP9P41817 RRG1YDR065W 1098 nt2.01□□□□□ -2.09
CUP9P41817 GCN4YEL009C 846 nt2.01□□□□□ -2.09
CUP9P41817 LAC1YKL008C 1257 nt2.01□□□□□ -2.09
CUP9P41817 YLR311CYLR311C 348 nt2.01□□□□□ -2.09
CUP9P41817 ATG34YOL083W 1239 nt2.01□□□□□ -2.09
CUP9P41817 HSP10YOR020C 321 nt2.01□□□□□ -2.09
CUP9P41817 DGK1YOR311C 873 nt2.01□□□□□ -2.09
CUP9P41817 VPS13YLL040C 9435 nt2.01□□□□□ -2.09
CUP9P41817 TRS130YMR218C 3309 nt2.01□□□□□ -2.09
CUP9P41817 RLI1YDR091C 1827 nt2.01□□□□□ -2.09
CUP9P41817 AVT2YEL064C 1443 nt2□□□□□ -2.09
CUP9P41817 MSH4YFL003C 2637 nt2□□□□□ -2.09
CUP9P41817 ECM11YDR446W 909 nt2□□□□□ -2.09
CUP9P41817 ISC10YER180C 804 nt2□□□□□ -2.09
CUP9P41817 LTP1YPR073C 486 nt2□□□□□ -2.09
CUP9P41817 DNL4YOR005C 2835 nt2□□□□□ -2.09
CUP9P41817 UTP22YGR090W 3714 nt2□□□□□ -2.09
CUP9P41817 STN1YDR082W 1485 nt2□□□□□ -2.09
CUP9P41817 RPL35BYDL136W 363 nt1.99□□□□□ -2.09
CUP9P41817 BRP1YGL007W 378 nt1.99□□□□□ -2.09
CUP9P41817 YGL159WYGL159W 1113 nt1.99□□□□□ -2.09
CUP9P41817 TFA2YKR062W 987 nt1.99□□□□□ -2.09
CUP9P41817 OMA1YKR087C 1038 nt1.99□□□□□ -2.09
CUP9P41817 UBC12YLR306W 567 nt1.99□□□□□ -2.09
CUP9P41817 YBL055CYBL055C 1257 nt1.99□□□□□ -2.09
CUP9P41817 ALG14YBR070C 714 nt1.99□□□□□ -2.09
CUP9P41817 JID1YPR061C 906 nt1.99□□□□□ -2.09
CUP9P41817 CLN3YAL040C 1743 nt1.99□□□□□ -2.09
CUP9P41817 KOG1YHR186C 4674 nt1.99□□□□□ -2.09
CUP9P41817 IRC3YDR332W 2070 nt1.98□□□□□ -2.09
CUP9P41817 APC5YOR249C 2058 nt1.98□□□□□ -2.09
CUP9P41817 SSE1YPL106C 2082 nt1.98□□□□□ -2.09
CUP9P41817 HMO1YDR174W 741 nt1.98□□□□□ -2.09
CUP9P41817 DDI2YFL061W 678 nt1.98□□□□□ -2.09
CUP9P41817 YFR010W-AYFR010W-A 189 nt1.98□□□□□ -2.09
CUP9P41817 PEX4YGR133W 552 nt1.98□□□□□ -2.09
CUP9P41817 MCR1YKL150W 909 nt1.98□□□□□ -2.09
CUP9P41817 CDC123YLR215C 1083 nt1.98□□□□□ -2.09
CUP9P41817 RPS22BYLR367W 393 nt1.98□□□□□ -2.09
CUP9P41817 YNL162W-AYNL162W-A 219 nt1.98□□□□□ -2.09
CUP9P41817 MUM2YBR057C 1101 nt1.98□□□□□ -2.09
CUP9P41817 SSD1YDR293C 3753 nt1.98□□□□□ -2.09
CUP9P41817 DNF1YER166W 4716 nt1.98□□□□□ -2.09
CUP9P41817 SSN2YDR443C 4263 nt1.97□□□□□ -2.09
CUP9P41817 YBR259WYBR259W 2067 nt1.97□□□□□ -2.09
CUP9P41817 SNX41YDR425W 1878 nt1.97□□□□□ -2.09
CUP9P41817 BOI1YBL085W 2943 nt1.97□□□□□ -2.09
CUP9P41817 YDL026WYDL026W 312 nt1.97□□□□□ -2.09
CUP9P41817 EMP24YGL200C 612 nt1.97□□□□□ -2.09
CUP9P41817 SPC24YMR117C 642 nt1.97□□□□□ -2.09
CUP9P41817 FPR1YNL135C 345 nt1.97□□□□□ -2.09
CUP9P41817 HRT1YOL133W 366 nt1.97□□□□□ -2.09
CUP9P41817 YOR203WYOR203W 354 nt1.97□□□□□ -2.09
CUP9P41817 SRL1YOR247W 633 nt1.97□□□□□ -2.09
CUP9P41817 GPI2YPL076W 843 nt1.97□□□□□ -2.09
CUP9P41817 REG2YBR050C 1017 nt1.97□□□□□ -2.09
CUP9P41817 MSS18YPR134W 807 nt1.97□□□□□ -2.09
CUP9P41817 ATG11YPR049C 3537 nt1.97□□□□□ -2.09
CUP9P41817 RPN4YDL020C 1596 nt1.97□□□□□ -2.09
CUP9P41817 VHR1YIL056W 1923 nt1.97□□□□□ -2.09
CUP9P41817 AVT5YBL089W 1380 nt1.97□□□□□ -2.09
CUP9P41817 ALK2YBL009W 2031 nt1.96□□□□□ -2.09
CUP9P41817 PSP1YDR505C 2526 nt1.96□□□□□ -2.09
CUP9P41817 YNL011CYNL011C 1335 nt1.96□□□□□ -2.1
CUP9P41817 WHI3YNL197C 1986 nt1.96□□□□□ -2.1
CUP9P41817 TCA17YEL048C 459 nt1.96□□□□□ -2.1
CUP9P41817 ADH4YGL256W 1149 nt1.96□□□□□ -2.1
CUP9P41817 RPS25AYGR027C 327 nt1.96□□□□□ -2.1
CUP9P41817 YLR255CYLR255C 354 nt1.96□□□□□ -2.1
CUP9P41817 NNT1YLR285W 786 nt1.96□□□□□ -2.1
CUP9P41817 RPS1AYLR441C 768 nt1.96□□□□□ -2.1
CUP9P41817 ERV41YML067C 1059 nt1.96□□□□□ -2.1
CUP9P41817 ATG19YOL082W 1248 nt1.96□□□□□ -2.1
CUP9P41817 YOL114CYOL114C 609 nt1.96□□□□□ -2.1
CUP9P41817 KRE33YNL132W 3171 nt1.96□□□□□ -2.1
CUP9P41817 YPK1YKL126W 2043 nt1.96□□□□□ -2.1
CUP9P41817 TOR2YKL203C 7425 nt1.96□□□□□ -2.1
CUP9P41817 FIR1YER032W 2631 nt1.96□□□□□ -2.1
CUP9P41817 FAR11YNL127W 2862 nt1.96□□□□□ -2.1
CUP9P41817 YBT1YLL048C 4986 nt1.95□□□□□ -2.1
CUP9P41817 KHA1YJL094C 2622 nt1.95□□□□□ -2.1
CUP9P41817 TFC3YAL001C 3483 nt1.95□□□□□ -2.1
CUP9P41817 YDR290WYDR290W 330 nt1.95□□□□□ -2.1
CUP9P41817 COBQ0105 1158 nt1.95□□□□□ -2.1
CUP9P41817 YGR168CYGR168C 1131 nt1.95□□□□□ -2.1
CUP9P41817 YAL026C-AYAL026C-A 438 nt1.95□□□□□ -2.1
CUP9P41817 RPS29AYLR388W 171 nt1.95□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 25.3 ms