Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCK1P35558 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCK1P35558 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCK1P35558 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCK1P35558 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCK1P35558 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.94■■□□□ 1.1
PCK1P35558 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCK1P35558 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCK1P35558 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.94■■□□□ 1.1
PCK1P35558 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.94■■□□□ 1.1
PCK1P35558 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.94■■□□□ 1.1
PCK1P35558 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.94■■□□□ 1.1
PCK1P35558 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.94■■□□□ 1.1
PCK1P35558 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.94■■□□□ 1.1
PCK1P35558 LINC02228-203ENST00000641970 1355 ntBASIC21.94■■□□□ 1.1
PCK1P35558 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCK1P35558 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCK1P35558 AL049796.1-201ENST00000565336 1766 ntBASIC21.94■■□□□ 1.1
PCK1P35558 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCK1P35558 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCK1P35558 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCK1P35558 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.94■■□□□ 1.1
PCK1P35558 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.93■■□□□ 1.1
PCK1P35558 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PCK1P35558 AC123595.1-201ENST00000440769 1046 ntBASIC21.93■■□□□ 1.1
PCK1P35558 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 AC079140.4-201ENST00000507448 529 ntBASIC21.93■■□□□ 1.1
PCK1P35558 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.93■■□□□ 1.1
PCK1P35558 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCK1P35558 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PCK1P35558 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCK1P35558 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.92■■□□□ 1.1
PCK1P35558 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCK1P35558 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCK1P35558 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCK1P35558 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCK1P35558 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCK1P35558 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
PCK1P35558 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCK1P35558 KRT87P-202ENST00000534226 1464 ntBASIC21.91■■□□□ 1.1
PCK1P35558 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCK1P35558 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCK1P35558 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.91■■□□□ 1.1
PCK1P35558 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.91■■□□□ 1.1
PCK1P35558 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCK1P35558 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCK1P35558 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCK1P35558 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCK1P35558 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.91■■□□□ 1.1
PCK1P35558 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.9■■□□□ 1.1
PCK1P35558 ZNRF2P3-201ENST00000424200 374 ntBASIC21.9■■□□□ 1.1
PCK1P35558 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCK1P35558 YBX1P1-201ENST00000445822 960 ntBASIC21.9■■□□□ 1.1
PCK1P35558 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.9■■□□□ 1.1
PCK1P35558 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCK1P35558 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCK1P35558 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PCK1P35558 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCK1P35558 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PCK1P35558 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
PCK1P35558 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.89■■□□□ 1.1
PCK1P35558 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCK1P35558 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCK1P35558 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCK1P35558 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.89■■□□□ 1.09
PCK1P35558 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.89■■□□□ 1.09
PCK1P35558 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PCK1P35558 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCK1P35558 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.89■■□□□ 1.09
PCK1P35558 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
PCK1P35558 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
PCK1P35558 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCK1P35558 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PCK1P35558 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCK1P35558 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCK1P35558 TERF1P2-201ENST00000583350 1212 ntBASIC21.88■■□□□ 1.09
PCK1P35558 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCK1P35558 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCK1P35558 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.88■■□□□ 1.09
PCK1P35558 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.88■■□□□ 1.09
PCK1P35558 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCK1P35558 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCK1P35558 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCK1P35558 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.87■■□□□ 1.09
PCK1P35558 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCK1P35558 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCK1P35558 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCK1P35558 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCK1P35558 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCK1P35558 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.87■■□□□ 1.09
PCK1P35558 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PCK1P35558 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms