Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.83■■□□□ 1.41
CNGA1P29973 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNGA1P29973 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNGA1P29973 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CNGA1P29973 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CNGA1P29973 UNC93B5-201ENST00000530315 699 ntBASIC23.83■■□□□ 1.41
CNGA1P29973 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.83■■□□□ 1.41
CNGA1P29973 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.83■■□□□ 1.41
CNGA1P29973 AC073648.6-201ENST00000641589 218 ntBASIC23.83■■□□□ 1.41
CNGA1P29973 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CNGA1P29973 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.83■■□□□ 1.41
CNGA1P29973 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CNGA1P29973 KRT16P2-201ENST00000414673 1423 ntBASIC23.83■■□□□ 1.4
CNGA1P29973 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CNGA1P29973 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CNGA1P29973 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNGA1P29973 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.82■■□□□ 1.4
CNGA1P29973 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNGA1P29973 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNGA1P29973 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.82■■□□□ 1.4
CNGA1P29973 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CNGA1P29973 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.82■■□□□ 1.4
CNGA1P29973 AP003097.1-201ENST00000530657 1135 ntBASIC23.82■■□□□ 1.4
CNGA1P29973 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CNGA1P29973 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.82■■□□□ 1.4
CNGA1P29973 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.82■■□□□ 1.4
CNGA1P29973 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.82■■□□□ 1.4
CNGA1P29973 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.82■■□□□ 1.4
CNGA1P29973 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.82■■□□□ 1.4
CNGA1P29973 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CNGA1P29973 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNGA1P29973 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CNGA1P29973 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CNGA1P29973 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CNGA1P29973 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.81■■□□□ 1.4
CNGA1P29973 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNGA1P29973 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.81■■□□□ 1.4
CNGA1P29973 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.81■■□□□ 1.4
CNGA1P29973 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.81■■□□□ 1.4
CNGA1P29973 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.81■■□□□ 1.4
CNGA1P29973 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CNGA1P29973 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNGA1P29973 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.81■■□□□ 1.4
CNGA1P29973 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNGA1P29973 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNGA1P29973 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNGA1P29973 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.8■■□□□ 1.4
CNGA1P29973 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNGA1P29973 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNGA1P29973 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CNGA1P29973 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNGA1P29973 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CNGA1P29973 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.8■■□□□ 1.4
CNGA1P29973 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.8■■□□□ 1.4
CNGA1P29973 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CNGA1P29973 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.8■■□□□ 1.4
CNGA1P29973 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
CNGA1P29973 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNGA1P29973 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.79■■□□□ 1.4
CNGA1P29973 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.79■■□□□ 1.4
CNGA1P29973 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CNGA1P29973 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNGA1P29973 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.79■■□□□ 1.4
CNGA1P29973 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNGA1P29973 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNGA1P29973 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.79■■□□□ 1.4
CNGA1P29973 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.79■■□□□ 1.4
CNGA1P29973 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.79■■□□□ 1.4
CNGA1P29973 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.79■■□□□ 1.4
CNGA1P29973 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CNGA1P29973 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CNGA1P29973 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.79■■□□□ 1.4
CNGA1P29973 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.79■■□□□ 1.4
CNGA1P29973 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNGA1P29973 AC080038.3-201ENST00000623346 1952 ntBASIC23.79■■□□□ 1.4
CNGA1P29973 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNGA1P29973 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CNGA1P29973 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.79■■□□□ 1.4
CNGA1P29973 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNGA1P29973 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.78■■□□□ 1.4
CNGA1P29973 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNGA1P29973 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CNGA1P29973 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNGA1P29973 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNGA1P29973 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNGA1P29973 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.78■■□□□ 1.4
CNGA1P29973 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.78■■□□□ 1.4
CNGA1P29973 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.78■■□□□ 1.4
CNGA1P29973 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNGA1P29973 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNGA1P29973 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNGA1P29973 AC061975.6-201ENST00000579045 1553 ntBASIC23.78■■□□□ 1.4
CNGA1P29973 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNGA1P29973 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CNGA1P29973 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNGA1P29973 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.77■■□□□ 1.4
CNGA1P29973 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CNGA1P29973 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CNGA1P29973 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.77■■□□□ 1.4
CNGA1P29973 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms