Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF1P18846 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF1P18846 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATF1P18846 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.32■□□□□ 0.52
ATF1P18846 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ATF1P18846 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.32■□□□□ 0.52
ATF1P18846 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF1P18846 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATF1P18846 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF1P18846 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF1P18846 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ATF1P18846 AC003102.1-202ENST00000563394 1796 ntBASIC18.32■□□□□ 0.52
ATF1P18846 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATF1P18846 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.32■□□□□ 0.52
ATF1P18846 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
ATF1P18846 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATF1P18846 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATF1P18846 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.31■□□□□ 0.52
ATF1P18846 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.31■□□□□ 0.52
ATF1P18846 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF1P18846 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF1P18846 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.31■□□□□ 0.52
ATF1P18846 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.31■□□□□ 0.52
ATF1P18846 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATF1P18846 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.31■□□□□ 0.52
ATF1P18846 PLK5-205ENST00000642079 1969 ntBASIC18.31■□□□□ 0.52
ATF1P18846 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF1P18846 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF1P18846 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF1P18846 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATF1P18846 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.3■□□□□ 0.52
ATF1P18846 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
ATF1P18846 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.3■□□□□ 0.52
ATF1P18846 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.3■□□□□ 0.52
ATF1P18846 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.3■□□□□ 0.52
ATF1P18846 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.3■□□□□ 0.52
ATF1P18846 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
ATF1P18846 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
ATF1P18846 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.3■□□□□ 0.52
ATF1P18846 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.3■□□□□ 0.52
ATF1P18846 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.3■□□□□ 0.52
ATF1P18846 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.3■□□□□ 0.52
ATF1P18846 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATF1P18846 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.29■□□□□ 0.52
ATF1P18846 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATF1P18846 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.29■□□□□ 0.52
ATF1P18846 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.29■□□□□ 0.52
ATF1P18846 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.29■□□□□ 0.52
ATF1P18846 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ATF1P18846 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATF1P18846 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.29■□□□□ 0.52
ATF1P18846 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATF1P18846 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
ATF1P18846 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.28■□□□□ 0.52
ATF1P18846 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.28■□□□□ 0.52
ATF1P18846 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.28■□□□□ 0.52
ATF1P18846 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 AL136116.3-201ENST00000402907 1138 ntBASIC18.28■□□□□ 0.52
ATF1P18846 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.28■□□□□ 0.52
ATF1P18846 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATF1P18846 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATF1P18846 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATF1P18846 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.28■□□□□ 0.52
ATF1P18846 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.28■□□□□ 0.52
ATF1P18846 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATF1P18846 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATF1P18846 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATF1P18846 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.27■□□□□ 0.52
ATF1P18846 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.27■□□□□ 0.52
ATF1P18846 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms