Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.9■■□□□ 1.74
COL11A2P13942 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
COL11A2P13942 LINC01023-201ENST00000606054 436 ntBASIC25.9■■□□□ 1.74
COL11A2P13942 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.9■■□□□ 1.74
COL11A2P13942 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.9■■□□□ 1.74
COL11A2P13942 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL11A2P13942 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
COL11A2P13942 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.9■■□□□ 1.74
COL11A2P13942 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
COL11A2P13942 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
COL11A2P13942 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.89■■□□□ 1.74
COL11A2P13942 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
COL11A2P13942 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.89■■□□□ 1.74
COL11A2P13942 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.89■■□□□ 1.74
COL11A2P13942 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
COL11A2P13942 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL11A2P13942 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL11A2P13942 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL11A2P13942 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL11A2P13942 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.88■■□□□ 1.73
COL11A2P13942 CDV3P1-201ENST00000471403 739 ntBASIC25.88■■□□□ 1.73
COL11A2P13942 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
COL11A2P13942 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.88■■□□□ 1.73
COL11A2P13942 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL11A2P13942 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL11A2P13942 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL11A2P13942 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.88■■□□□ 1.73
COL11A2P13942 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL11A2P13942 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
COL11A2P13942 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL11A2P13942 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL11A2P13942 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.88■■□□□ 1.73
COL11A2P13942 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.88■■□□□ 1.73
COL11A2P13942 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.88■■□□□ 1.73
COL11A2P13942 AC010331.1-201ENST00000611423 582 ntBASIC25.88■■□□□ 1.73
COL11A2P13942 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL11A2P13942 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL11A2P13942 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL11A2P13942 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL11A2P13942 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.87■■□□□ 1.73
COL11A2P13942 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL11A2P13942 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.87■■□□□ 1.73
COL11A2P13942 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
COL11A2P13942 BX088651.1-201ENST00000540551 451 ntBASIC25.87■■□□□ 1.73
COL11A2P13942 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL11A2P13942 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.87■■□□□ 1.73
COL11A2P13942 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
COL11A2P13942 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
COL11A2P13942 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL11A2P13942 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.87■■□□□ 1.73
COL11A2P13942 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.87■■□□□ 1.73
COL11A2P13942 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL11A2P13942 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL11A2P13942 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.86■■□□□ 1.73
COL11A2P13942 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.86■■□□□ 1.73
COL11A2P13942 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL11A2P13942 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.86■■□□□ 1.73
COL11A2P13942 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL11A2P13942 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC25.86■■□□□ 1.73
COL11A2P13942 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL11A2P13942 MIR1224-201ENST00000408193 85 ntBASIC25.85■■□□□ 1.73
COL11A2P13942 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.85■■□□□ 1.73
COL11A2P13942 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.85■■□□□ 1.73
COL11A2P13942 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL11A2P13942 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL11A2P13942 AC026471.6-201ENST00000622954 1905 ntBASIC25.85■■□□□ 1.73
COL11A2P13942 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL11A2P13942 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
COL11A2P13942 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.85■■□□□ 1.73
COL11A2P13942 RN7SL471P-201ENST00000580476 299 ntBASIC25.85■■□□□ 1.73
COL11A2P13942 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL11A2P13942 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
COL11A2P13942 FAM210CP-201ENST00000445714 574 ntBASIC25.84■■□□□ 1.73
COL11A2P13942 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.84■■□□□ 1.73
COL11A2P13942 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.84■■□□□ 1.73
COL11A2P13942 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL11A2P13942 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL11A2P13942 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL11A2P13942 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25.83■■□□□ 1.73
COL11A2P13942 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL11A2P13942 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL11A2P13942 TSPY7P-201ENST00000431358 1114 ntBASIC25.83■■□□□ 1.73
COL11A2P13942 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL11A2P13942 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL11A2P13942 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
COL11A2P13942 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
COL11A2P13942 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL11A2P13942 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL11A2P13942 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
COL11A2P13942 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.83■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms