Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.24■□□□□ 0.51
LCATP04180 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.24■□□□□ 0.51
LCATP04180 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 LINC02228-203ENST00000641970 1355 ntBASIC18.24■□□□□ 0.51
LCATP04180 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.24■□□□□ 0.51
LCATP04180 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LCATP04180 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LCATP04180 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.23■□□□□ 0.51
LCATP04180 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.23■□□□□ 0.51
LCATP04180 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.23■□□□□ 0.51
LCATP04180 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 ZNRF2P3-201ENST00000424200 374 ntBASIC18.23■□□□□ 0.51
LCATP04180 AC053503.5-201ENST00000601508 636 ntBASIC18.23■□□□□ 0.51
LCATP04180 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.23■□□□□ 0.51
LCATP04180 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LCATP04180 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCATP04180 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCATP04180 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.22■□□□□ 0.51
LCATP04180 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCATP04180 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LCATP04180 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.22■□□□□ 0.51
LCATP04180 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LCATP04180 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCATP04180 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCATP04180 EEF1DP3-203ENST00000566025 782 ntBASIC18.22■□□□□ 0.51
LCATP04180 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.22■□□□□ 0.51
LCATP04180 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.22■□□□□ 0.51
LCATP04180 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.22■□□□□ 0.51
LCATP04180 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCATP04180 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCATP04180 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCATP04180 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.22■□□□□ 0.51
LCATP04180 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCATP04180 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LCATP04180 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.22■□□□□ 0.51
LCATP04180 AL049796.1-201ENST00000565336 1766 ntBASIC18.22■□□□□ 0.51
LCATP04180 KRT87P-202ENST00000534226 1464 ntBASIC18.21■□□□□ 0.51
LCATP04180 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.21■□□□□ 0.51
LCATP04180 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.21■□□□□ 0.51
LCATP04180 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.21■□□□□ 0.51
LCATP04180 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.21■□□□□ 0.51
LCATP04180 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LCATP04180 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.21■□□□□ 0.51
LCATP04180 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.21■□□□□ 0.51
LCATP04180 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCATP04180 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCATP04180 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
LCATP04180 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LCATP04180 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCATP04180 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LCATP04180 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCATP04180 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCATP04180 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCATP04180 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.2■□□□□ 0.5
LCATP04180 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCATP04180 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCATP04180 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LCATP04180 AC123595.1-201ENST00000440769 1046 ntBASIC18.2■□□□□ 0.5
LCATP04180 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LCATP04180 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LCATP04180 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LCATP04180 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.2■□□□□ 0.5
LCATP04180 AIRN-201ENST00000601203 4374 ntBASIC18.2■□□□□ 0.5
LCATP04180 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCATP04180 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCATP04180 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.19■□□□□ 0.5
LCATP04180 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.19■□□□□ 0.5
LCATP04180 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCATP04180 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCATP04180 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCATP04180 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LCATP04180 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LCATP04180 YBX1P1-201ENST00000445822 960 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms