Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC4O75487 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GPC4O75487 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GPC4O75487 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC4O75487 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GPC4O75487 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GPC4O75487 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.87■□□□□ 0.93
GPC4O75487 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.87■□□□□ 0.93
GPC4O75487 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.87■□□□□ 0.93
GPC4O75487 TERF1P2-201ENST00000583350 1212 ntBASIC20.87■□□□□ 0.93
GPC4O75487 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.87■□□□□ 0.93
GPC4O75487 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.87■□□□□ 0.93
GPC4O75487 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC4O75487 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GPC4O75487 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.87■□□□□ 0.93
GPC4O75487 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC4O75487 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GPC4O75487 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC4O75487 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.86■□□□□ 0.93
GPC4O75487 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC4O75487 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC4O75487 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
GPC4O75487 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
GPC4O75487 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC4O75487 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.86■□□□□ 0.93
GPC4O75487 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC4O75487 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.86■□□□□ 0.93
GPC4O75487 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.86■□□□□ 0.93
GPC4O75487 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.86■□□□□ 0.93
GPC4O75487 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC4O75487 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GPC4O75487 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.86■□□□□ 0.93
GPC4O75487 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GPC4O75487 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC4O75487 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
GPC4O75487 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.85■□□□□ 0.93
GPC4O75487 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.85■□□□□ 0.93
GPC4O75487 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
GPC4O75487 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GPC4O75487 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC4O75487 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
GPC4O75487 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.85■□□□□ 0.93
GPC4O75487 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC4O75487 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.85■□□□□ 0.93
GPC4O75487 AC104564.3-201ENST00000582367 638 ntBASIC20.85■□□□□ 0.93
GPC4O75487 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC4O75487 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
GPC4O75487 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GPC4O75487 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC4O75487 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GPC4O75487 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.85■□□□□ 0.93
GPC4O75487 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.84■□□□□ 0.93
GPC4O75487 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.84■□□□□ 0.93
GPC4O75487 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
GPC4O75487 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.84■□□□□ 0.93
GPC4O75487 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 CCDC92B-201ENST00000575506 885 ntBASIC20.84■□□□□ 0.93
GPC4O75487 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.84■□□□□ 0.93
GPC4O75487 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.84■□□□□ 0.93
GPC4O75487 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GPC4O75487 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
GPC4O75487 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC4O75487 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
GPC4O75487 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.83■□□□□ 0.93
GPC4O75487 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GPC4O75487 AC097381.1-201ENST00000429019 1296 ntBASIC20.83■□□□□ 0.93
GPC4O75487 MIR6821-201ENST00000617625 74 ntBASIC20.83■□□□□ 0.93
GPC4O75487 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.83■□□□□ 0.93
GPC4O75487 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GPC4O75487 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
GPC4O75487 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.82■□□□□ 0.92
GPC4O75487 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC4O75487 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPC4O75487 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.82■□□□□ 0.92
GPC4O75487 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPC4O75487 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC4O75487 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
GPC4O75487 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GPC4O75487 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.82■□□□□ 0.92
GPC4O75487 FEM1AP4-201ENST00000443167 1987 ntBASIC20.82■□□□□ 0.92
GPC4O75487 SLC25A24-204ENST00000569674 2357 ntBASIC20.82■□□□□ 0.92
GPC4O75487 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC4O75487 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.82■□□□□ 0.92
GPC4O75487 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.82■□□□□ 0.92
GPC4O75487 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GPC4O75487 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
GPC4O75487 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms