Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PFDN1O60925 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PFDN1O60925 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PFDN1O60925 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PFDN1O60925 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.76■□□□□ 0.59
PFDN1O60925 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PFDN1O60925 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PFDN1O60925 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PFDN1O60925 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PFDN1O60925 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PFDN1O60925 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PFDN1O60925 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PFDN1O60925 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PFDN1O60925 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PFDN1O60925 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.75■□□□□ 0.59
PFDN1O60925 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PFDN1O60925 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.75■□□□□ 0.59
PFDN1O60925 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.75■□□□□ 0.59
PFDN1O60925 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.75■□□□□ 0.59
PFDN1O60925 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
PFDN1O60925 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PFDN1O60925 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.74■□□□□ 0.59
PFDN1O60925 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PFDN1O60925 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PFDN1O60925 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.74■□□□□ 0.59
PFDN1O60925 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.74■□□□□ 0.59
PFDN1O60925 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PFDN1O60925 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.74■□□□□ 0.59
PFDN1O60925 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PFDN1O60925 MIR6090-201ENST00000622481 60 ntBASIC18.74■□□□□ 0.59
PFDN1O60925 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PFDN1O60925 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PFDN1O60925 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PFDN1O60925 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.74■□□□□ 0.59
PFDN1O60925 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PFDN1O60925 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PFDN1O60925 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PFDN1O60925 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PFDN1O60925 AL049812.1-201ENST00000432563 2267 ntBASIC18.74■□□□□ 0.59
PFDN1O60925 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PFDN1O60925 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PFDN1O60925 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PFDN1O60925 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PFDN1O60925 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PFDN1O60925 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PFDN1O60925 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
PFDN1O60925 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.73■□□□□ 0.59
PFDN1O60925 MIR762-201ENST00000390236 83 ntBASIC18.73■□□□□ 0.59
PFDN1O60925 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.73■□□□□ 0.59
PFDN1O60925 RARRES2P7-201ENST00000567349 469 ntBASIC18.73■□□□□ 0.59
PFDN1O60925 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.73■□□□□ 0.59
PFDN1O60925 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.73■□□□□ 0.59
PFDN1O60925 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.73■□□□□ 0.59
PFDN1O60925 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PFDN1O60925 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.73■□□□□ 0.59
PFDN1O60925 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.73■□□□□ 0.59
PFDN1O60925 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PFDN1O60925 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PFDN1O60925 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PFDN1O60925 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.73■□□□□ 0.59
PFDN1O60925 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.73■□□□□ 0.59
PFDN1O60925 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PFDN1O60925 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 AC112907.3-201ENST00000577781 2400 ntBASIC18.72■□□□□ 0.59
PFDN1O60925 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.72■□□□□ 0.59
PFDN1O60925 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PFDN1O60925 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PFDN1O60925 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PFDN1O60925 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
PFDN1O60925 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
PFDN1O60925 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.71■□□□□ 0.59
PFDN1O60925 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PFDN1O60925 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.71■□□□□ 0.59
PFDN1O60925 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN1O60925 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN1O60925 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN1O60925 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN1O60925 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN1O60925 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN1O60925 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN1O60925 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN1O60925 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PFDN1O60925 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms