Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.41■□□□□ 0.54
GMDSO60547 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GMDSO60547 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.41■□□□□ 0.54
GMDSO60547 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.41■□□□□ 0.54
GMDSO60547 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GMDSO60547 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.41■□□□□ 0.54
GMDSO60547 AL034346.1-201ENST00000568244 1277 ntBASIC18.41■□□□□ 0.54
GMDSO60547 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GMDSO60547 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.41■□□□□ 0.54
GMDSO60547 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
GMDSO60547 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GMDSO60547 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
GMDSO60547 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GMDSO60547 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.4■□□□□ 0.54
GMDSO60547 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.4■□□□□ 0.54
GMDSO60547 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
GMDSO60547 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.4■□□□□ 0.54
GMDSO60547 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.4■□□□□ 0.54
GMDSO60547 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.4■□□□□ 0.54
GMDSO60547 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.4■□□□□ 0.54
GMDSO60547 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GMDSO60547 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
GMDSO60547 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.39■□□□□ 0.53
GMDSO60547 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GMDSO60547 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GMDSO60547 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GMDSO60547 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GMDSO60547 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GMDSO60547 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.39■□□□□ 0.53
GMDSO60547 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.39■□□□□ 0.53
GMDSO60547 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.39■□□□□ 0.53
GMDSO60547 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.39■□□□□ 0.53
GMDSO60547 AC104564.3-201ENST00000582367 638 ntBASIC18.39■□□□□ 0.53
GMDSO60547 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GMDSO60547 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
GMDSO60547 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GMDSO60547 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.39■□□□□ 0.53
GMDSO60547 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.39■□□□□ 0.53
GMDSO60547 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GMDSO60547 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.39■□□□□ 0.53
GMDSO60547 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GMDSO60547 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 AP004607.7-201ENST00000527152 1677 ntBASIC18.38■□□□□ 0.53
GMDSO60547 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
GMDSO60547 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
GMDSO60547 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.38■□□□□ 0.53
GMDSO60547 MIR572-201ENST00000384983 95 ntBASIC18.38■□□□□ 0.53
GMDSO60547 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GMDSO60547 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.38■□□□□ 0.53
GMDSO60547 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GMDSO60547 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GMDSO60547 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.37■□□□□ 0.53
GMDSO60547 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.37■□□□□ 0.53
GMDSO60547 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GMDSO60547 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.37■□□□□ 0.53
GMDSO60547 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
GMDSO60547 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.37■□□□□ 0.53
GMDSO60547 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GMDSO60547 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.37■□□□□ 0.53
GMDSO60547 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GMDSO60547 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.37■□□□□ 0.53
GMDSO60547 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GMDSO60547 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GMDSO60547 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GMDSO60547 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GMDSO60547 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.36■□□□□ 0.53
GMDSO60547 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.36■□□□□ 0.53
GMDSO60547 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms