Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NPHS1O60500 AC007225.1-201ENST00000566331 1836 ntBASIC20.39■□□□□ 0.85
NPHS1O60500 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.39■□□□□ 0.85
NPHS1O60500 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NPHS1O60500 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPHS1O60500 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPHS1O60500 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NPHS1O60500 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPHS1O60500 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.38■□□□□ 0.85
NPHS1O60500 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.38■□□□□ 0.85
NPHS1O60500 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NPHS1O60500 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPHS1O60500 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.38■□□□□ 0.85
NPHS1O60500 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.38■□□□□ 0.85
NPHS1O60500 AC126544.1-201ENST00000580842 1059 ntBASIC20.38■□□□□ 0.85
NPHS1O60500 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPHS1O60500 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPHS1O60500 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPHS1O60500 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.38■□□□□ 0.85
NPHS1O60500 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NPHS1O60500 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NPHS1O60500 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.37■□□□□ 0.85
NPHS1O60500 AC027702.1-201ENST00000563810 1770 ntBASIC20.37■□□□□ 0.85
NPHS1O60500 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.37■□□□□ 0.85
NPHS1O60500 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.37■□□□□ 0.85
NPHS1O60500 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.37■□□□□ 0.85
NPHS1O60500 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NPHS1O60500 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NPHS1O60500 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.37■□□□□ 0.85
NPHS1O60500 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NPHS1O60500 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPHS1O60500 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
NPHS1O60500 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.36■□□□□ 0.85
NPHS1O60500 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHS1O60500 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPHS1O60500 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NPHS1O60500 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHS1O60500 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHS1O60500 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPHS1O60500 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPHS1O60500 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.36■□□□□ 0.85
NPHS1O60500 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NPHS1O60500 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.36■□□□□ 0.85
NPHS1O60500 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
NPHS1O60500 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.36■□□□□ 0.85
NPHS1O60500 AC005224.4-201ENST00000583262 1652 ntBASIC20.35■□□□□ 0.85
NPHS1O60500 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NPHS1O60500 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHS1O60500 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NPHS1O60500 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHS1O60500 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHS1O60500 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.35■□□□□ 0.85
NPHS1O60500 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHS1O60500 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHS1O60500 UNC93B3-201ENST00000308076 687 ntBASIC20.35■□□□□ 0.85
NPHS1O60500 AL136116.3-201ENST00000402907 1138 ntBASIC20.35■□□□□ 0.85
NPHS1O60500 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPHS1O60500 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.35■□□□□ 0.85
NPHS1O60500 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPHS1O60500 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.35■□□□□ 0.85
NPHS1O60500 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHS1O60500 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NPHS1O60500 AC020907.5-201ENST00000624372 1936 ntBASIC20.35■□□□□ 0.85
NPHS1O60500 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.35■□□□□ 0.85
NPHS1O60500 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPHS1O60500 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.35■□□□□ 0.85
NPHS1O60500 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.34■□□□□ 0.85
NPHS1O60500 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NPHS1O60500 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NPHS1O60500 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NPHS1O60500 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.34■□□□□ 0.85
NPHS1O60500 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.34■□□□□ 0.85
NPHS1O60500 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.34■□□□□ 0.85
NPHS1O60500 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPHS1O60500 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPHS1O60500 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPHS1O60500 AL121603.2-201ENST00000557373 2117 ntBASIC20.33■□□□□ 0.85
NPHS1O60500 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NPHS1O60500 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms