Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHGA12O60330 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHGA12O60330 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA12O60330 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA12O60330 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA12O60330 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGA12O60330 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA12O60330 AC097658.1-201ENST00000475555 843 ntBASIC20.72■□□□□ 0.91
PCDHGA12O60330 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGA12O60330 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGA12O60330 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHGA12O60330 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA12O60330 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA12O60330 AC083880.1-201ENST00000608266 535 ntBASIC20.72■□□□□ 0.91
PCDHGA12O60330 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGA12O60330 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGA12O60330 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA12O60330 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA12O60330 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGA12O60330 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA12O60330 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGA12O60330 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA12O60330 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA12O60330 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA12O60330 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
PCDHGA12O60330 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA12O60330 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGA12O60330 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDHGA12O60330 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHGA12O60330 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.71■□□□□ 0.91
PCDHGA12O60330 RARRES2P4-201ENST00000514074 484 ntBASIC20.71■□□□□ 0.91
PCDHGA12O60330 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGA12O60330 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDHGA12O60330 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA12O60330 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA12O60330 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA12O60330 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA12O60330 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
PCDHGA12O60330 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDHGA12O60330 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGA12O60330 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA12O60330 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA12O60330 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA12O60330 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA12O60330 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA12O60330 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA12O60330 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA12O60330 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGA12O60330 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGA12O60330 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA12O60330 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHGA12O60330 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA12O60330 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA12O60330 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA12O60330 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA12O60330 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGA12O60330 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA12O60330 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHGA12O60330 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA12O60330 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGA12O60330 KRT16P2-201ENST00000414673 1423 ntBASIC20.69■□□□□ 0.9
PCDHGA12O60330 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGA12O60330 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDHGA12O60330 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA12O60330 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA12O60330 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGA12O60330 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA12O60330 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA12O60330 ESRRAP1-201ENST00000400596 1257 ntBASIC20.68■□□□□ 0.9
PCDHGA12O60330 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHGA12O60330 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA12O60330 AL591742.1-201ENST00000604433 565 ntBASIC20.68■□□□□ 0.9
PCDHGA12O60330 AP006294.2-201ENST00000641667 209 ntBASIC20.68■□□□□ 0.9
PCDHGA12O60330 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA12O60330 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGA12O60330 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA12O60330 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGA12O60330 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA12O60330 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGA12O60330 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHGA12O60330 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA12O60330 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA12O60330 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA12O60330 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA12O60330 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA12O60330 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA12O60330 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGA12O60330 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGA12O60330 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
PCDHGA12O60330 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHGA12O60330 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms