Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.58■□□□□ 0.89
VEGFDO43915 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.58■□□□□ 0.89
VEGFDO43915 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.58■□□□□ 0.89
VEGFDO43915 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VEGFDO43915 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
VEGFDO43915 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
VEGFDO43915 CNN2P6-201ENST00000439038 900 ntBASIC20.58■□□□□ 0.89
VEGFDO43915 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.58■□□□□ 0.89
VEGFDO43915 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
VEGFDO43915 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
VEGFDO43915 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VEGFDO43915 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
VEGFDO43915 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFDO43915 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.57■□□□□ 0.88
VEGFDO43915 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.57■□□□□ 0.88
VEGFDO43915 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
VEGFDO43915 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFDO43915 Z98882.1-201ENST00000622160 2253 ntBASIC20.57■□□□□ 0.88
VEGFDO43915 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.57■□□□□ 0.88
VEGFDO43915 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFDO43915 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.57■□□□□ 0.88
VEGFDO43915 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFDO43915 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFDO43915 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.57■□□□□ 0.88
VEGFDO43915 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFDO43915 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.57■□□□□ 0.88
VEGFDO43915 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
VEGFDO43915 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VEGFDO43915 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFDO43915 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VEGFDO43915 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VEGFDO43915 LINC00565-201ENST00000562710 2331 ntBASIC20.56■□□□□ 0.88
VEGFDO43915 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.56■□□□□ 0.88
VEGFDO43915 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
VEGFDO43915 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VEGFDO43915 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VEGFDO43915 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.56■□□□□ 0.88
VEGFDO43915 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VEGFDO43915 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VEGFDO43915 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
VEGFDO43915 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VEGFDO43915 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VEGFDO43915 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.56■□□□□ 0.88
VEGFDO43915 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VEGFDO43915 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.56■□□□□ 0.88
VEGFDO43915 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.56■□□□□ 0.88
VEGFDO43915 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VEGFDO43915 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VEGFDO43915 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.55■□□□□ 0.88
VEGFDO43915 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VEGFDO43915 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
VEGFDO43915 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VEGFDO43915 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VEGFDO43915 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VEGFDO43915 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.55■□□□□ 0.88
VEGFDO43915 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.55■□□□□ 0.88
VEGFDO43915 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.55■□□□□ 0.88
VEGFDO43915 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VEGFDO43915 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.54■□□□□ 0.88
VEGFDO43915 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.54■□□□□ 0.88
VEGFDO43915 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.54■□□□□ 0.88
VEGFDO43915 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.54■□□□□ 0.88
VEGFDO43915 AL162412.1-201ENST00000567129 965 ntBASIC20.54■□□□□ 0.88
VEGFDO43915 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VEGFDO43915 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.53■□□□□ 0.88
VEGFDO43915 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.53■□□□□ 0.88
VEGFDO43915 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
VEGFDO43915 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.53■□□□□ 0.88
VEGFDO43915 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFDO43915 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFDO43915 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFDO43915 CROCCP5-201ENST00000436658 830 ntBASIC20.53■□□□□ 0.88
VEGFDO43915 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFDO43915 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.53■□□□□ 0.88
VEGFDO43915 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.53■□□□□ 0.88
VEGFDO43915 AL591742.1-201ENST00000604433 565 ntBASIC20.53■□□□□ 0.88
VEGFDO43915 AC005181.1-201ENST00000604782 1256 ntBASIC20.53■□□□□ 0.88
VEGFDO43915 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFDO43915 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VEGFDO43915 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VEGFDO43915 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.53■□□□□ 0.88
VEGFDO43915 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.53■□□□□ 0.88
VEGFDO43915 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.53■□□□□ 0.88
VEGFDO43915 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
VEGFDO43915 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VEGFDO43915 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
VEGFDO43915 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms