Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN6O43657 GUSBP6-202ENST00000438529 1198 ntBASIC20.92■□□□□ 0.94
TSPAN6O43657 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN6O43657 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN6O43657 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TSPAN6O43657 AC142086.2-201ENST00000569753 217 ntBASIC20.92■□□□□ 0.94
TSPAN6O43657 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
TSPAN6O43657 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN6O43657 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN6O43657 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN6O43657 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN6O43657 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN6O43657 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN6O43657 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.92■□□□□ 0.94
TSPAN6O43657 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN6O43657 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN6O43657 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TSPAN6O43657 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN6O43657 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.91■□□□□ 0.94
TSPAN6O43657 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.9■□□□□ 0.94
TSPAN6O43657 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.9■□□□□ 0.94
TSPAN6O43657 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.9■□□□□ 0.94
TSPAN6O43657 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TSPAN6O43657 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.9■□□□□ 0.94
TSPAN6O43657 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TSPAN6O43657 AL512625.2-201ENST00000417533 625 ntBASIC20.9■□□□□ 0.94
TSPAN6O43657 AC245052.3-201ENST00000450182 901 ntBASIC20.9■□□□□ 0.94
TSPAN6O43657 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.9■□□□□ 0.94
TSPAN6O43657 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.9■□□□□ 0.94
TSPAN6O43657 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.9■□□□□ 0.94
TSPAN6O43657 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 FBXW4P1-201ENST00000426721 2239 ntBASIC20.9■□□□□ 0.94
TSPAN6O43657 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN6O43657 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.89■□□□□ 0.94
TSPAN6O43657 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
TSPAN6O43657 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.89■□□□□ 0.94
TSPAN6O43657 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN6O43657 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN6O43657 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TSPAN6O43657 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN6O43657 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN6O43657 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.89■□□□□ 0.93
TSPAN6O43657 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
TSPAN6O43657 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.89■□□□□ 0.93
TSPAN6O43657 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN6O43657 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TSPAN6O43657 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN6O43657 LINC00565-201ENST00000562710 2331 ntBASIC20.89■□□□□ 0.93
TSPAN6O43657 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN6O43657 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN6O43657 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TSPAN6O43657 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.88■□□□□ 0.93
TSPAN6O43657 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN6O43657 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN6O43657 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TSPAN6O43657 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TSPAN6O43657 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN6O43657 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN6O43657 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN6O43657 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TSPAN6O43657 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN6O43657 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.88■□□□□ 0.93
TSPAN6O43657 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.88■□□□□ 0.93
TSPAN6O43657 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.88■□□□□ 0.93
TSPAN6O43657 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.88■□□□□ 0.93
TSPAN6O43657 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN6O43657 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.88■□□□□ 0.93
TSPAN6O43657 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN6O43657 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TSPAN6O43657 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TSPAN6O43657 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.87■□□□□ 0.93
TSPAN6O43657 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TSPAN6O43657 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TSPAN6O43657 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TSPAN6O43657 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.87■□□□□ 0.93
TSPAN6O43657 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.87■□□□□ 0.93
TSPAN6O43657 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.87■□□□□ 0.93
TSPAN6O43657 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.87■□□□□ 0.93
TSPAN6O43657 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.87■□□□□ 0.93
TSPAN6O43657 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.87■□□□□ 0.93
TSPAN6O43657 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TSPAN6O43657 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms