Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFS4O43181 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.04■□□□□ 0.8
NDUFS4O43181 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.04■□□□□ 0.8
NDUFS4O43181 AC137761.2-201ENST00000561729 223 ntBASIC20.04■□□□□ 0.8
NDUFS4O43181 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.04■□□□□ 0.8
NDUFS4O43181 AC145350.3-201ENST00000569033 163 ntBASIC20.04■□□□□ 0.8
NDUFS4O43181 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.04■□□□□ 0.8
NDUFS4O43181 AC120498.10-201ENST00000621827 505 ntBASIC20.04■□□□□ 0.8
NDUFS4O43181 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFS4O43181 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFS4O43181 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFS4O43181 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NDUFS4O43181 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NDUFS4O43181 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.04■□□□□ 0.8
NDUFS4O43181 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFS4O43181 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFS4O43181 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.03■□□□□ 0.8
NDUFS4O43181 AL137060.1-201ENST00000618151 2648 ntBASIC20.03■□□□□ 0.8
NDUFS4O43181 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.03■□□□□ 0.8
NDUFS4O43181 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFS4O43181 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.03■□□□□ 0.8
NDUFS4O43181 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.03■□□□□ 0.8
NDUFS4O43181 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.03■□□□□ 0.8
NDUFS4O43181 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFS4O43181 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
NDUFS4O43181 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NDUFS4O43181 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFS4O43181 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.03■□□□□ 0.8
NDUFS4O43181 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFS4O43181 AF106564.1-201ENST00000607058 2553 ntBASIC20.02■□□□□ 0.8
NDUFS4O43181 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS4O43181 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS4O43181 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS4O43181 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.02■□□□□ 0.8
NDUFS4O43181 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS4O43181 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS4O43181 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
NDUFS4O43181 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS4O43181 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.02■□□□□ 0.8
NDUFS4O43181 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NDUFS4O43181 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS4O43181 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NDUFS4O43181 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NDUFS4O43181 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NDUFS4O43181 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NDUFS4O43181 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS4O43181 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS4O43181 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS4O43181 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.01■□□□□ 0.79
NDUFS4O43181 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS4O43181 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS4O43181 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS4O43181 AC016769.1-201ENST00000409132 1010 ntBASIC20.01■□□□□ 0.79
NDUFS4O43181 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.01■□□□□ 0.79
NDUFS4O43181 KRT18P20-201ENST00000548986 1279 ntBASIC20.01■□□□□ 0.79
NDUFS4O43181 SLC7A5P2-201ENST00000553010 536 ntBASIC20.01■□□□□ 0.79
NDUFS4O43181 UBE2DNL-204ENST00000602536 740 ntBASIC20.01■□□□□ 0.79
NDUFS4O43181 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
NDUFS4O43181 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.01■□□□□ 0.79
NDUFS4O43181 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NDUFS4O43181 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NDUFS4O43181 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS4O43181 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDUFS4O43181 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS4O43181 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS4O43181 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NDUFS4O43181 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS4O43181 AC005229.4-201ENST00000610085 2198 ntBASIC20■□□□□ 0.79
NDUFS4O43181 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS4O43181 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS4O43181 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20■□□□□ 0.79
NDUFS4O43181 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20■□□□□ 0.79
NDUFS4O43181 AC022517.1-201ENST00000592429 346 ntBASIC20■□□□□ 0.79
NDUFS4O43181 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS4O43181 KRT16P2-201ENST00000414673 1423 ntBASIC20■□□□□ 0.79
NDUFS4O43181 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NDUFS4O43181 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS4O43181 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS4O43181 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS4O43181 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NDUFS4O43181 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.99■□□□□ 0.79
NDUFS4O43181 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS4O43181 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS4O43181 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS4O43181 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS4O43181 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.99■□□□□ 0.79
NDUFS4O43181 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS4O43181 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.99■□□□□ 0.79
NDUFS4O43181 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.99■□□□□ 0.79
NDUFS4O43181 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NDUFS4O43181 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NDUFS4O43181 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NDUFS4O43181 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NDUFS4O43181 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.99■□□□□ 0.79
NDUFS4O43181 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NDUFS4O43181 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDUFS4O43181 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms