Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNRC18O15417 AP000550.4-202ENST00000639755 178 ntBASIC23.21■■□□□ 1.31
TNRC18O15417 AC079630.1-202ENST00000618127 1840 ntBASIC23.2■■□□□ 1.31
TNRC18O15417 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNRC18O15417 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNRC18O15417 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TNRC18O15417 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNRC18O15417 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.2■■□□□ 1.3
TNRC18O15417 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TNRC18O15417 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNRC18O15417 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TNRC18O15417 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNRC18O15417 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.2■■□□□ 1.3
TNRC18O15417 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.2■■□□□ 1.3
TNRC18O15417 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TNRC18O15417 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.2■■□□□ 1.3
TNRC18O15417 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.2■■□□□ 1.3
TNRC18O15417 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.2■■□□□ 1.3
TNRC18O15417 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNRC18O15417 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNRC18O15417 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TNRC18O15417 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.19■■□□□ 1.3
TNRC18O15417 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.19■■□□□ 1.3
TNRC18O15417 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.19■■□□□ 1.3
TNRC18O15417 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNRC18O15417 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNRC18O15417 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.19■■□□□ 1.3
TNRC18O15417 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.19■■□□□ 1.3
TNRC18O15417 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.19■■□□□ 1.3
TNRC18O15417 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNRC18O15417 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.19■■□□□ 1.3
TNRC18O15417 AF186192.3-201ENST00000583427 947 ntBASIC23.19■■□□□ 1.3
TNRC18O15417 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.19■■□□□ 1.3
TNRC18O15417 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.19■■□□□ 1.3
TNRC18O15417 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNRC18O15417 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TNRC18O15417 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
TNRC18O15417 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNRC18O15417 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.19■■□□□ 1.3
TNRC18O15417 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNRC18O15417 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNRC18O15417 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNRC18O15417 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNRC18O15417 AC246785.2-201ENST00000432512 513 ntBASIC23.18■■□□□ 1.3
TNRC18O15417 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNRC18O15417 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC23.18■■□□□ 1.3
TNRC18O15417 KRT18P16-201ENST00000510337 1294 ntBASIC23.18■■□□□ 1.3
TNRC18O15417 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.18■■□□□ 1.3
TNRC18O15417 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNRC18O15417 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNRC18O15417 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TNRC18O15417 AC027702.1-201ENST00000563810 1770 ntBASIC23.17■■□□□ 1.3
TNRC18O15417 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.17■■□□□ 1.3
TNRC18O15417 KRT16P2-201ENST00000414673 1423 ntBASIC23.17■■□□□ 1.3
TNRC18O15417 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TNRC18O15417 KRASP1-201ENST00000407852 552 ntBASIC23.17■■□□□ 1.3
TNRC18O15417 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TNRC18O15417 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNRC18O15417 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
TNRC18O15417 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.16■■□□□ 1.3
TNRC18O15417 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNRC18O15417 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.16■■□□□ 1.3
TNRC18O15417 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.16■■□□□ 1.3
TNRC18O15417 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNRC18O15417 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNRC18O15417 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNRC18O15417 UNC93B2-201ENST00000285383 730 ntBASIC23.16■■□□□ 1.3
TNRC18O15417 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNRC18O15417 AC022616.7-201ENST00000525383 220 ntBASIC23.16■■□□□ 1.3
TNRC18O15417 AC053503.5-201ENST00000601508 636 ntBASIC23.16■■□□□ 1.3
TNRC18O15417 AP000525.1-201ENST00000608286 694 ntBASIC23.16■■□□□ 1.3
TNRC18O15417 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TNRC18O15417 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TNRC18O15417 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNRC18O15417 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNRC18O15417 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
TNRC18O15417 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.15■■□□□ 1.3
TNRC18O15417 AL589743.5-201ENST00000616611 1050 ntBASIC23.15■■□□□ 1.3
TNRC18O15417 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.15■■□□□ 1.3
TNRC18O15417 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TNRC18O15417 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.15■■□□□ 1.3
TNRC18O15417 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.15■■□□□ 1.3
TNRC18O15417 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.15■■□□□ 1.3
TNRC18O15417 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.15■■□□□ 1.3
TNRC18O15417 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TNRC18O15417 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.15■■□□□ 1.3
TNRC18O15417 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.15■■□□□ 1.3
TNRC18O15417 LINC00543-201ENST00000567234 1845 ntBASIC23.14■■□□□ 1.3
TNRC18O15417 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.14■■□□□ 1.3
TNRC18O15417 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.14■■□□□ 1.3
TNRC18O15417 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TNRC18O15417 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.14■■□□□ 1.29
TNRC18O15417 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TNRC18O15417 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNRC18O15417 AL355355.2-201ENST00000442321 338 ntBASIC23.14■■□□□ 1.29
TNRC18O15417 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.14■■□□□ 1.29
TNRC18O15417 AC087633.2-202ENST00000565166 1439 ntBASIC23.14■■□□□ 1.29
TNRC18O15417 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TNRC18O15417 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNRC18O15417 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms