Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TSPAN4O14817 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.42■□□□□ 0.38
TSPAN4O14817 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN4O14817 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN4O14817 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TSPAN4O14817 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN4O14817 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN4O14817 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN4O14817 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN4O14817 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TSPAN4O14817 AC021242.3-201ENST00000607598 1377 ntBASIC17.41■□□□□ 0.38
TSPAN4O14817 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN4O14817 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN4O14817 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN4O14817 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN4O14817 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN4O14817 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TSPAN4O14817 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN4O14817 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN4O14817 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN4O14817 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN4O14817 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN4O14817 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN4O14817 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.41■□□□□ 0.38
TSPAN4O14817 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.41■□□□□ 0.38
TSPAN4O14817 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TSPAN4O14817 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.4■□□□□ 0.38
TSPAN4O14817 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 AC005332.8-201ENST00000622750 2735 ntBASIC17.4■□□□□ 0.38
TSPAN4O14817 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 AC239859.2-201ENST00000444165 318 ntBASIC17.4■□□□□ 0.38
TSPAN4O14817 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.4■□□□□ 0.38
TSPAN4O14817 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.4■□□□□ 0.38
TSPAN4O14817 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.4■□□□□ 0.38
TSPAN4O14817 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.4■□□□□ 0.38
TSPAN4O14817 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.4■□□□□ 0.38
TSPAN4O14817 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TSPAN4O14817 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TSPAN4O14817 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN4O14817 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.4■□□□□ 0.38
TSPAN4O14817 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TSPAN4O14817 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TSPAN4O14817 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.39■□□□□ 0.38
TSPAN4O14817 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.39■□□□□ 0.37
TSPAN4O14817 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN4O14817 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN4O14817 FEM1AP1-201ENST00000431297 1995 ntBASIC17.39■□□□□ 0.37
TSPAN4O14817 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.39■□□□□ 0.37
TSPAN4O14817 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TSPAN4O14817 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.39■□□□□ 0.37
TSPAN4O14817 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.39■□□□□ 0.37
TSPAN4O14817 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN4O14817 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN4O14817 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN4O14817 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TSPAN4O14817 SMG8-203ENST00000578922 2178 ntBASIC17.39■□□□□ 0.37
TSPAN4O14817 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 AL161729.1-201ENST00000604104 1402 ntBASIC17.38■□□□□ 0.37
TSPAN4O14817 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TSPAN4O14817 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.38■□□□□ 0.37
TSPAN4O14817 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.38■□□□□ 0.37
TSPAN4O14817 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.38■□□□□ 0.37
TSPAN4O14817 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.38■□□□□ 0.37
TSPAN4O14817 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.38■□□□□ 0.37
TSPAN4O14817 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.38■□□□□ 0.37
TSPAN4O14817 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.38■□□□□ 0.37
TSPAN4O14817 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
TSPAN4O14817 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN4O14817 AC004408.2-201ENST00000623613 2777 ntBASIC17.38■□□□□ 0.37
TSPAN4O14817 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.38■□□□□ 0.37
TSPAN4O14817 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms