Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NDUFA4O00483 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA4O00483 KRT19P1-201ENST00000405746 1186 ntBASIC16.05■□□□□ 0.16
NDUFA4O00483 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA4O00483 AC034268.1-201ENST00000441047 882 ntBASIC16.05■□□□□ 0.16
NDUFA4O00483 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.05■□□□□ 0.16
NDUFA4O00483 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.05■□□□□ 0.16
NDUFA4O00483 MIR6821-201ENST00000617625 74 ntBASIC16.05■□□□□ 0.16
NDUFA4O00483 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFA4O00483 AL137060.1-201ENST00000618151 2648 ntBASIC16.05■□□□□ 0.16
NDUFA4O00483 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.05■□□□□ 0.16
NDUFA4O00483 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA4O00483 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA4O00483 AC005229.4-201ENST00000610085 2198 ntBASIC16.04■□□□□ 0.16
NDUFA4O00483 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.04■□□□□ 0.16
NDUFA4O00483 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA4O00483 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.04■□□□□ 0.16
NDUFA4O00483 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NDUFA4O00483 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA4O00483 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA4O00483 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
NDUFA4O00483 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.04■□□□□ 0.16
NDUFA4O00483 KRT18P20-201ENST00000548986 1279 ntBASIC16.04■□□□□ 0.16
NDUFA4O00483 AP001160.3-201ENST00000601484 763 ntBASIC16.04■□□□□ 0.16
NDUFA4O00483 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA4O00483 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA4O00483 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NDUFA4O00483 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA4O00483 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFA4O00483 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 AC004854.2-201ENST00000608450 1441 ntBASIC16.03■□□□□ 0.16
NDUFA4O00483 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 AF106564.1-201ENST00000607058 2553 ntBASIC16.03■□□□□ 0.16
NDUFA4O00483 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NDUFA4O00483 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.03■□□□□ 0.16
NDUFA4O00483 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.03■□□□□ 0.16
NDUFA4O00483 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.03■□□□□ 0.16
NDUFA4O00483 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NDUFA4O00483 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NDUFA4O00483 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFA4O00483 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NDUFA4O00483 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NDUFA4O00483 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NDUFA4O00483 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.03■□□□□ 0.16
NDUFA4O00483 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.03■□□□□ 0.16
NDUFA4O00483 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NDUFA4O00483 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA4O00483 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA4O00483 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NDUFA4O00483 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA4O00483 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NDUFA4O00483 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NDUFA4O00483 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA4O00483 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA4O00483 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NDUFA4O00483 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA4O00483 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NDUFA4O00483 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.02■□□□□ 0.16
NDUFA4O00483 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.02■□□□□ 0.16
NDUFA4O00483 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDUFA4O00483 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.02■□□□□ 0.16
NDUFA4O00483 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.02■□□□□ 0.16
NDUFA4O00483 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
NDUFA4O00483 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.02■□□□□ 0.15
NDUFA4O00483 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDUFA4O00483 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDUFA4O00483 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.02■□□□□ 0.15
NDUFA4O00483 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NDUFA4O00483 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA4O00483 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA4O00483 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.01■□□□□ 0.15
NDUFA4O00483 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.01■□□□□ 0.15
NDUFA4O00483 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA4O00483 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.01■□□□□ 0.15
NDUFA4O00483 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.01■□□□□ 0.15
NDUFA4O00483 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA4O00483 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA4O00483 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.01■□□□□ 0.15
NDUFA4O00483 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.01■□□□□ 0.15
NDUFA4O00483 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NDUFA4O00483 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA4O00483 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA4O00483 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.01■□□□□ 0.15
NDUFA4O00483 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NDUFA4O00483 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NDUFA4O00483 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms