Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RNF223E7ERA6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF223E7ERA6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF223E7ERA6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF223E7ERA6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF223E7ERA6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF223E7ERA6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF223E7ERA6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF223E7ERA6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF223E7ERA6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF223E7ERA6 KRT17P3-201ENST00000420566 1262 ntBASIC17.37■□□□□ 0.37
RNF223E7ERA6 AC091799.1-201ENST00000422823 811 ntBASIC17.37■□□□□ 0.37
RNF223E7ERA6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF223E7ERA6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.37■□□□□ 0.37
RNF223E7ERA6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF223E7ERA6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF223E7ERA6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF223E7ERA6 AL589743.5-201ENST00000616611 1050 ntBASIC17.37■□□□□ 0.37
RNF223E7ERA6 AC003102.1-202ENST00000563394 1796 ntBASIC17.37■□□□□ 0.37
RNF223E7ERA6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RNF223E7ERA6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF223E7ERA6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
RNF223E7ERA6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF223E7ERA6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF223E7ERA6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF223E7ERA6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF223E7ERA6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RNF223E7ERA6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF223E7ERA6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF223E7ERA6 AC245052.3-201ENST00000450182 901 ntBASIC17.36■□□□□ 0.37
RNF223E7ERA6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF223E7ERA6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF223E7ERA6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
RNF223E7ERA6 PNMA6B-201ENST00000538162 1200 ntBASIC17.36■□□□□ 0.37
RNF223E7ERA6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF223E7ERA6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF223E7ERA6 AC100791.3-201ENST00000617619 330 ntBASIC17.36■□□□□ 0.37
RNF223E7ERA6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF223E7ERA6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RNF223E7ERA6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF223E7ERA6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF223E7ERA6 AC092368.3-202ENST00000574180 1591 ntBASIC17.36■□□□□ 0.37
RNF223E7ERA6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF223E7ERA6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF223E7ERA6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF223E7ERA6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 MIR4497-201ENST00000583208 89 ntBASIC17.35■□□□□ 0.37
RNF223E7ERA6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF223E7ERA6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF223E7ERA6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF223E7ERA6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF223E7ERA6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF223E7ERA6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF223E7ERA6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF223E7ERA6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF223E7ERA6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF223E7ERA6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 ECEL1P3-201ENST00000427961 737 ntBASIC17.34■□□□□ 0.37
RNF223E7ERA6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF223E7ERA6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms