Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VGLL3A8MV65 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VGLL3A8MV65 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VGLL3A8MV65 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.47■□□□□ 0.87
VGLL3A8MV65 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.47■□□□□ 0.87
VGLL3A8MV65 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VGLL3A8MV65 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.47■□□□□ 0.87
VGLL3A8MV65 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VGLL3A8MV65 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VGLL3A8MV65 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 AC124067.4-201ENST00000519691 2379 ntBASIC20.46■□□□□ 0.87
VGLL3A8MV65 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.46■□□□□ 0.87
VGLL3A8MV65 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
VGLL3A8MV65 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
VGLL3A8MV65 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.45■□□□□ 0.86
VGLL3A8MV65 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.45■□□□□ 0.86
VGLL3A8MV65 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VGLL3A8MV65 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VGLL3A8MV65 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VGLL3A8MV65 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.44■□□□□ 0.86
VGLL3A8MV65 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
VGLL3A8MV65 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.44■□□□□ 0.86
VGLL3A8MV65 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VGLL3A8MV65 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
VGLL3A8MV65 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.44■□□□□ 0.86
VGLL3A8MV65 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VGLL3A8MV65 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
VGLL3A8MV65 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
VGLL3A8MV65 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VGLL3A8MV65 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.43■□□□□ 0.86
VGLL3A8MV65 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VGLL3A8MV65 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VGLL3A8MV65 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VGLL3A8MV65 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VGLL3A8MV65 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VGLL3A8MV65 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VGLL3A8MV65 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VGLL3A8MV65 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.43■□□□□ 0.86
VGLL3A8MV65 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.43■□□□□ 0.86
VGLL3A8MV65 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VGLL3A8MV65 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
VGLL3A8MV65 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.42■□□□□ 0.86
VGLL3A8MV65 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.42■□□□□ 0.86
VGLL3A8MV65 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
VGLL3A8MV65 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VGLL3A8MV65 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms