Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 SMG8-203ENST00000578922 2178 ntBASIC22.6■■□□□ 1.21
USP27XA6NNY8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP27XA6NNY8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP27XA6NNY8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
USP27XA6NNY8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP27XA6NNY8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.6■■□□□ 1.21
USP27XA6NNY8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP27XA6NNY8 AC006455.2-201ENST00000429931 906 ntBASIC22.6■■□□□ 1.21
USP27XA6NNY8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP27XA6NNY8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.6■■□□□ 1.21
USP27XA6NNY8 AC098818.2-201ENST00000564925 2320 ntBASIC22.6■■□□□ 1.21
USP27XA6NNY8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.6■■□□□ 1.21
USP27XA6NNY8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
USP27XA6NNY8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
USP27XA6NNY8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
USP27XA6NNY8 AC121338.2-201ENST00000622535 1744 ntBASIC22.6■■□□□ 1.21
USP27XA6NNY8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP27XA6NNY8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP27XA6NNY8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.59■■□□□ 1.21
USP27XA6NNY8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.59■■□□□ 1.21
USP27XA6NNY8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
USP27XA6NNY8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP27XA6NNY8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
USP27XA6NNY8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP27XA6NNY8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
USP27XA6NNY8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP27XA6NNY8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.58■■□□□ 1.21
USP27XA6NNY8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.58■■□□□ 1.21
USP27XA6NNY8 AL031848.2-201ENST00000607670 837 ntBASIC22.58■■□□□ 1.21
USP27XA6NNY8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
USP27XA6NNY8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
USP27XA6NNY8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
USP27XA6NNY8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
USP27XA6NNY8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
USP27XA6NNY8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.58■■□□□ 1.2
USP27XA6NNY8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP27XA6NNY8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP27XA6NNY8 AC092028.1-203ENST00000608262 953 ntBASIC22.57■■□□□ 1.2
USP27XA6NNY8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP27XA6NNY8 AC116562.4-201ENST00000641316 2276 ntBASIC22.57■■□□□ 1.2
USP27XA6NNY8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
USP27XA6NNY8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP27XA6NNY8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.57■■□□□ 1.2
USP27XA6NNY8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP27XA6NNY8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
USP27XA6NNY8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.56■■□□□ 1.2
USP27XA6NNY8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP27XA6NNY8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
USP27XA6NNY8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.56■■□□□ 1.2
USP27XA6NNY8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP27XA6NNY8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP27XA6NNY8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP27XA6NNY8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP27XA6NNY8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
USP27XA6NNY8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP27XA6NNY8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP27XA6NNY8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.55■■□□□ 1.2
USP27XA6NNY8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.55■■□□□ 1.2
USP27XA6NNY8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP27XA6NNY8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
USP27XA6NNY8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP27XA6NNY8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
USP27XA6NNY8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.55■■□□□ 1.2
USP27XA6NNY8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.55■■□□□ 1.2
USP27XA6NNY8 YBX1P4-201ENST00000392794 808 ntBASIC22.55■■□□□ 1.2
USP27XA6NNY8 pRNA.6-201ENST00000610482 90 ntBASIC22.55■■□□□ 1.2
USP27XA6NNY8 pRNA.5-201ENST00000612139 90 ntBASIC22.55■■□□□ 1.2
USP27XA6NNY8 pRNA.11-201ENST00000618423 90 ntBASIC22.55■■□□□ 1.2
USP27XA6NNY8 pRNA.13-201ENST00000619112 90 ntBASIC22.55■■□□□ 1.2
USP27XA6NNY8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.55■■□□□ 1.2
USP27XA6NNY8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.55■■□□□ 1.2
USP27XA6NNY8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
USP27XA6NNY8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.55■■□□□ 1.2
USP27XA6NNY8 AP004607.7-201ENST00000527152 1677 ntBASIC22.55■■□□□ 1.2
USP27XA6NNY8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
USP27XA6NNY8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP27XA6NNY8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
USP27XA6NNY8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP27XA6NNY8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP27XA6NNY8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
USP27XA6NNY8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP27XA6NNY8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
USP27XA6NNY8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
USP27XA6NNY8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP27XA6NNY8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.53■■□□□ 1.2
USP27XA6NNY8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.53■■□□□ 1.2
USP27XA6NNY8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP27XA6NNY8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
USP27XA6NNY8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP27XA6NNY8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.53■■□□□ 1.2
USP27XA6NNY8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP27XA6NNY8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.53■■□□□ 1.2
USP27XA6NNY8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
USP27XA6NNY8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
USP27XA6NNY8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP27XA6NNY8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP27XA6NNY8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
USP27XA6NNY8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP27XA6NNY8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
USP27XA6NNY8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms